PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK27683.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family CPP
Protein Properties Length: 269aa    MW: 30200.9 Da    PI: 7.365
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK27683.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR43.37.2e-14131169240
        TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                ++k+CnCkk++Cl++YC Cfa g++C + C+Ce+C+Nk 
  PK27683.1 131 SCKRCNCKKTECLNQYCVCFATGQYCLDPCNCENCFNKV 169
                689**********************************96 PP

2TCR247.7e-08191227339
        TCR   3 kkgCnCkkskClkkYCeCfaagkkCsee.CkCedCkNk 39 
                + gCnCk + C k+YC C +++  Cs e CkC  C+N 
  PK27683.1 191 RGGCNCK-TGCSKEYCICLKNKIGCSVEtCKCIACQNI 227
                569***5.89***************9666********6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011142.6E-10130171IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163421.28131229IPR005172CRC domain
PfamPF036383.1E-9133168IPR005172CRC domain
SMARTSM011142.3E-5189230IPR033467Tesmin/TSO1-like CXC domain
PfamPF036384.5E-6193226IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
QDLALQNFGL PTTSKSIGPG SDFSLERKGL LDQSNAEWSE ILNFGESSTS LNGLDFNNNS  60
LNVWGEISYN YSFGDGITKI DEQNILSSQN QYHHSEKESY GLPISQQTYE VESTRQEMNF  120
EPRLKRQKFN SCKRCNCKKT ECLNQYCVCF ATGQYCLDPC NCENCFNKVA FSEKVEVARK  180
MSLLKASTKR RGGCNCKTGC SKEYCICLKN KIGCSVETCK CIACQNIFGQ RKGATKEGEL  240
QGSEPNMHFR FPIQQPLDNI ISSSSINDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.11e-28TESMIN/TSO1-like CXC 2