PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK26966.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family G2-like
Protein Properties Length: 113aa    MW: 12847.6 Da    PI: 11.359
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK26966.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.96.1e-30151555
    G2-like  5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               rWtp LH++Fv+ave+LGG e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  PK26966.1  1 RWTPGLHRAFVHAVERLGGLERATPKLVLQLMSVKGLSIAHVKSHLQMYRS 51
               7*************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF002496.6E-7150IPR001005SANT/Myb domain
PROSITE profilePS5129413.278154IPR017930Myb domain
SuperFamilySSF466891.61E-13152IPR009057Homeodomain-like
TIGRFAMsTIGR015575.9E-22153IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.609.2E-27152IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
RWTPGLHRAF VHAVERLGGL ERATPKLVLQ LMSVKGLSIA HVKSHLQMYR SKKLDESGQV  60
LSHRNMGMQR DHIIQMCQRF SPYGGKFTMD NRSYSTATSS TSTFKHPITS SRX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-19153658Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-19153658Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-19153557Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-19153557Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-19153557Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-19153557Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-19153658Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-19153658Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-19153658Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-19153658Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-19153658Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-19153658Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010657046.11e-40PREDICTED: uncharacterized protein LOC104880828
TrEMBLA0A2P5FFB91e-45A0A2P5FFB9_TREOI; Octamer-binding transcription factor
STRINGVIT_12s0028g02080.t013e-42(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.18e-29G2-like family protein