PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK26554.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family GRF
Protein Properties Length: 480aa    MW: 53278.4 Da    PI: 7.2516
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK26554.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC74.51.2e-23248291144
        WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                d+ep+rCrRtDGKkWRCsr+v++++k+CErH h++r rsrk++e
  PK26554.1 248 DQEPWRCRRTDGKKWRCSRNVIPDQKYCERHSHKSRPRSRKHVE 291
                68****************************************97 PP

2QLQ47.26.6e-17185216233
        QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33 
                +FTa+Q q+L++Q +++Ky++a+ P+P++Ll 
  PK26554.1 185 PFTADQRQELERQTMIFKYMMASIPIPHQLLS 216
                8*****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009517.2E-8184220IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.8E-11185215IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166618.766185220IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.788248292IPR014977WRC domain
PfamPF088792.8E-19250291IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009941Cellular Componentchloroplast envelope
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MGTRIGFVAS EKGAEKECDV GLGLRMQTND TKSFSSRRKM MMMMTTTTTI PHHHTHQNHH  60
NHNSNEDEDG GDDDIVVDDE SSLYNNRAFV EESCNLGSGG GGGGTGGSAS GCGGGGGEND  120
STTGPKLFCN TSNQVVSMAN IYNNIVGLGS SDSLPKTLLI PNSESFYNNP SSGGGIMVNG  180
NMRFPFTADQ RQELERQTMI FKYMMASIPI PHQLLSSSSP KTIPPSNFAY FHSSNRGLEL  240
GMSNNNSDQE PWRCRRTDGK KWRCSRNVIP DQKYCERHSH KSRPRSRKHV ELQSHFLNNN  300
NNNTKNPYSK PESLDQQRKT HQHQHQSHDN QPRSMEWFMN SNQEWQHMIH QQQQTKQGLN  360
DQFSLLLDSS STDNQSSKTR HFIDAWSIAD ERDQLRFSNS SSSSSSSSSS LALSIHNSNN  420
NNEVVVSQNA QMSYNPILGS GMMMINNNNN NQVSWSGSVP HGGPLAEALC LGMPHQNSSK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2P5DJT01e-100A0A2P5DJT0_PARAD; Growth-regulating factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF138941621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.16e-26growth-regulating factor 2