PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK26402.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family Trihelix
Protein Properties Length: 992aa    MW: 111232 Da    PI: 8.1205
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK26402.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix292.9e-092453032382
   trihelix  23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                +gk ++ + +ev+++++++g++r +k+   kw+n+ ++++k+ e+e++++ e++   +yf
  PK26402.1 245 KGKTRADKDKEVADFLQRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREHV-GKSYF 303
                467888999***************************************977766.34455 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF561121.63E-11862992IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.103.9E-5863973No hitNo description
CDDcd001803.29E-9877992No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 992 aa     Download sequence    Send to blast
MGDNKGETTK KPQSSSKQQP QPQSQQQQIS SSSPKDAILD ESNETRPHHH HHPPHQQTST  60
VVVSGASHII SSPLYIPSGA TSSSPFDQQQ FDQAVNNPKR PRYTTTGQWK ILPSPSSQQK  120
QQQVAQMTIL TGESSPISAP QQQPPTQVVL HSTAAASSSD TASSPSHSIP SLSGSGQDTS  180
KPELAGENPV HQQFRKGKYV SPVWKPNEML WLARAWRVQY QGGGSSSRME SVSGADINLV  240
GSQTKGKTRA DKDKEVADFL QRHGVNRDAK TAGTKWDNML GEFRKVYEWE RGGEREHVGK  300
SYFRLSPYER KLHRLPASFD EEVFEELSQF MGSKMRTPLS TRPGSSLIVA GESRALTAPP  360
PFKEDDQFPL SAVRTTKQLI MGSGVETLYY GGRGGLMGFE SSVDMGGPSP PSTSSKDLRR  420
IGKIRMSWEE SVSLWAEEGE LHRGRVKLQT SSFLNADELT YLDDAMVATT MEAFEEGPLR  480
GFSVDRFVSG QQVKVFGRKK PFSVSASGFA EKVHQLPFTE PSVRSIPPWD FQDPSDYYVG  540
CLRVSPPSIP TLFELSWYLQ EAPPEELRLP LRKDVYRDLP QGKEHFFTIS NELVDCRAFT  600
YDILSPIIRT TPSLTSSTST SRDSFIGLWD DCINRIVSKF CSVDIVTVRK PTNPNSTEVL  660
QDQWPNMTGF VRNFCLWRGE ETDQVREGQI DPSNSLVEKL FWTYQDLPYI LGYYAVGFLV  720
TFCALSRGAN QDRIIRTDLQ SLDLSSPSDR LKALIPCYRI ASLLPLLADR CFHSVNNMIN  780
VVASSKMIPY SDFERLDTGN GNVTEITPNT VTRFYPNKRK WAAVKEIYDF LDHRIPHAEF  840
IHRSSEKNLG LVFKPRGFSK PARPINYDQL IESLKFVTKA LVALHDLSFM HRDLSWDKVV  900
RRVDRDNEWF VSGFEDAVVA PQIYPMVKLA GGGDQAAARG RHAPEMERGL HGVKVDVWGV  960
GYLVRTCGVG NVPKMLRELQ NRCLDQNPEQ RP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024029684.10.0uncharacterized protein LOC21396125
TrEMBLA0A2P5ER880.0A0A2P5ER88_TREOI; Protein kinase-like domain containing protein
STRINGXP_010109060.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118572831
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.13e-08Trihelix family protein