PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK26402.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | Trihelix | ||||||||
Protein Properties | Length: 992aa MW: 111232 Da PI: 8.1205 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 29 | 2.9e-09 | 245 | 303 | 23 | 82 |
trihelix 23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 +gk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++++ e++ +yf PK26402.1 245 KGKTRADKDKEVADFLQRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREHV-GKSYF 303 467888999***************************************977766.34455 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF56112 | 1.63E-11 | 862 | 992 | IPR011009 | Protein kinase-like domain |
Gene3D | G3DSA:1.10.510.10 | 3.9E-5 | 863 | 973 | No hit | No description |
CDD | cd00180 | 3.29E-9 | 877 | 992 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 992 aa Download sequence Send to blast |
MGDNKGETTK KPQSSSKQQP QPQSQQQQIS SSSPKDAILD ESNETRPHHH HHPPHQQTST 60 VVVSGASHII SSPLYIPSGA TSSSPFDQQQ FDQAVNNPKR PRYTTTGQWK ILPSPSSQQK 120 QQQVAQMTIL TGESSPISAP QQQPPTQVVL HSTAAASSSD TASSPSHSIP SLSGSGQDTS 180 KPELAGENPV HQQFRKGKYV SPVWKPNEML WLARAWRVQY QGGGSSSRME SVSGADINLV 240 GSQTKGKTRA DKDKEVADFL QRHGVNRDAK TAGTKWDNML GEFRKVYEWE RGGEREHVGK 300 SYFRLSPYER KLHRLPASFD EEVFEELSQF MGSKMRTPLS TRPGSSLIVA GESRALTAPP 360 PFKEDDQFPL SAVRTTKQLI MGSGVETLYY GGRGGLMGFE SSVDMGGPSP PSTSSKDLRR 420 IGKIRMSWEE SVSLWAEEGE LHRGRVKLQT SSFLNADELT YLDDAMVATT MEAFEEGPLR 480 GFSVDRFVSG QQVKVFGRKK PFSVSASGFA EKVHQLPFTE PSVRSIPPWD FQDPSDYYVG 540 CLRVSPPSIP TLFELSWYLQ EAPPEELRLP LRKDVYRDLP QGKEHFFTIS NELVDCRAFT 600 YDILSPIIRT TPSLTSSTST SRDSFIGLWD DCINRIVSKF CSVDIVTVRK PTNPNSTEVL 660 QDQWPNMTGF VRNFCLWRGE ETDQVREGQI DPSNSLVEKL FWTYQDLPYI LGYYAVGFLV 720 TFCALSRGAN QDRIIRTDLQ SLDLSSPSDR LKALIPCYRI ASLLPLLADR CFHSVNNMIN 780 VVASSKMIPY SDFERLDTGN GNVTEITPNT VTRFYPNKRK WAAVKEIYDF LDHRIPHAEF 840 IHRSSEKNLG LVFKPRGFSK PARPINYDQL IESLKFVTKA LVALHDLSFM HRDLSWDKVV 900 RRVDRDNEWF VSGFEDAVVA PQIYPMVKLA GGGDQAAARG RHAPEMERGL HGVKVDVWGV 960 GYLVRTCGVG NVPKMLRELQ NRCLDQNPEQ RP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024029684.1 | 0.0 | uncharacterized protein LOC21396125 | ||||
TrEMBL | A0A2P5ER88 | 0.0 | A0A2P5ER88_TREOI; Protein kinase-like domain containing protein | ||||
STRING | XP_010109060.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF11857 | 28 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 3e-08 | Trihelix family protein |