PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK25809.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family G2-like
Protein Properties Length: 455aa    MW: 50323.4 Da    PI: 7.1403
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK25809.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1071e-3368122155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                kprl+Wt++LHerFveav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl
  PK25809.1  68 KPRLKWTSDLHERFVEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 122
                79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.99765125IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-3166123IPR009057Homeodomain-like
SuperFamilySSF466891.08E-1667123IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-2368123IPR006447Myb domain, plants
PfamPF002494.7E-970121IPR001005SANT/Myb domain
PfamPF143791.3E-15172213IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MSSMYHHHHH HHLSGKNINM HVSSSNNNSS RNIPPERHLF LGNNGGGGGG SGGGSHGDAG  60
LVLSTDAKPR LKWTSDLHER FVEAVNQLGG ADKATPKTVM KLMGIPGLTL YHLKSHLQKY  120
RLSKNLHGQV SSPTKISTVG GGPVAERISE AMSGNHMNNL SINGPQTNNK GFHINETLQM  180
QIEVQRRLHE QLELRIEAQG KYLQAVLEKA QETLGRQNVG TVVGLEAAKV QLSELVSKVS  240
TQCLNSAFEA TPPPELASCP NPNPNPSPGR GRGDCSVDSC LTFEHGSQKD QEIAHGIVLR  300
AYNNNNNNNS ATTTTFFESK EGNNNTTTIT TPELLDQNNM FLKQERRLFS IERNGLSMSI  360
GGSNNNNHHH HHRDIRWDDT TRDQDRHKRF VKLDNNDEDD HDDDENNNEK VSRSSSIVPA  420
NFFATKVLDL NTHHNDQNDS SSNCKQFDLN GFSWS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-2067124158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-2067124158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-2068124157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-2068124157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-2068124157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-2068124157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-2067124158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-2067124158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-2067124158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-2067124158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-2067124158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-2067124158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00331DAPTransfer from AT3G04030Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024026934.11e-138myb-related protein 2 isoform X2
TrEMBLA0A2P5AJ571e-162A0A2P5AJ57_PARAD; Octamer-binding transcription factor
STRINGXP_010104961.11e-135(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38523163
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.32e-90G2-like family protein