PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PK24429.1

Organism

Cannabis sativa

Taxonomic ID

3483

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis

Family

VOZ

Protein Properties

Length: 446aa MW: 50042.2 Da PI: 5.0714

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PK24429.1	genome	CCBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	418.4	1.2e-128	211	427	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsl 100 pppsaf+gpkcalwdc+rpaqgs+w+qdycss+h++lalneg pg++pvlrp+gi++kd++lf+als k+qgkevgipecegaa++k+pwna+elfdlsl PK24429.1 211 PPPSAFMGPKCALWDCSRPAQGSKWCQDYCSSCHSVLALNEGVPGIAPVLRPTGIGMKDSPLFSALSLKIQGKEVGIPECEGAANTKCPWNAPELFDLSL 310 89************************************************************************************************ PP VOZ 101 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkv 200 l+ge +rewlffdkpr+afesgnrkqr lpdy+grgwhesrkqvmkefgglkrsyymdpqps+s+ewhlyeyein++ ++alyrlelklv++k+s+kgk PK24429.1 311 LQGEKLREWLFFDKPRKAFESGNRKQRGLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPSTSHEWHLYEYEINNYTTCALYRLELKLVEGKRSPKGKG 410 ************************************************************************************************ PP VOZ 201 skdsladlqkklgrlta 217 +dsladlqkk+grlta PK24429.1 411 LNDSLADLQKKMGRLTA 427 *************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence Send to blast
MLNDSKSKCE SVSHQNLKEK TKHRVDDLQR IFSNLESARK DSRPGDIAVF EEQVHQMLRE 60 WKVELSEPTP ASSLLGGSLG SFSEELARLL QQYDVEDDAT SPLKELPHPK PEPDPELNLE 120 NFDVGNFSAF ELDYFDNKEP QDHGFQGFPE LKGSGLDFHE TVPNDSNLIT GLEHQQFDMY 180 QDFSQGLIVG ANSINQCGQD PLPNVLPDIS PPPSAFMGPK CALWDCSRPA QGSKWCQDYC 240 SSCHSVLALN EGVPGIAPVL RPTGIGMKDS PLFSALSLKI QGKEVGIPEC EGAANTKCPW 300 NAPELFDLSL LQGEKLREWL FFDKPRKAFE SGNRKQRGLP DYNGRGWHES RKQVMKEFGG 360 LKRSYYMDPQ PSTSHEWHLY EYEINNYTTC ALYRLELKLV EGKRSPKGKG LNDSLADLQK 420 KMGRLTAEAP IDDGNSSMTK INTTQK

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence Send to blast

MLNDSKSKCE SVSHQNLKEK TKHRVDDLQR IFSNLESARK DSRPGDIAVF EEQVHQMLRE  60
WKVELSEPTP ASSLLGGSLG SFSEELARLL QQYDVEDDAT SPLKELPHPK PEPDPELNLE  120
NFDVGNFSAF ELDYFDNKEP QDHGFQGFPE LKGSGLDFHE TVPNDSNLIT GLEHQQFDMY  180
QDFSQGLIVG ANSINQCGQD PLPNVLPDIS PPPSAFMGPK CALWDCSRPA QGSKWCQDYC  240
SSCHSVLALN EGVPGIAPVL RPTGIGMKDS PLFSALSLKI QGKEVGIPEC EGAANTKCPW  300
NAPELFDLSL LQGEKLREWL FFDKPRKAFE SGNRKQRGLP DYNGRGWHES RKQVMKEFGG  360
LKRSYYMDPQ PSTSHEWHLY EYEINNYTTC ALYRLELKLV EGKRSPKGKG LNDSLADLQK  420
KMGRLTAEAP IDDGNSSMTK INTTQK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024019795.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	1e-173	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2P5E7P1	0.0	A0A2P5E7P1_TREOI; Cytochrome c-like domain containing protein
STRING	XP_010093981.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-165	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]