PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK23720.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | B3 | ||||||||
Protein Properties | Length: 108aa MW: 12404.1 Da PI: 7.8907 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.7 | 7.6e-12 | 7 | 74 | 32 | 97 |
--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 32 esktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++ +++l+ ++gr W+ ++++ +k++ + + +GW+eF+k +L+ gD+++F+l + ++++ v+++ PK23720.1 7 QG-DVILTGPNGRYWSSEFKMrtvkTKNP-GPRICNGWREFAKGYNLEIGDVCIFELLDGIQTTFEVSIV 74 33.89**********99997765533333.377889********************88766666777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50863 | 12.196 | 1 | 77 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.82E-14 | 5 | 75 | No hit | No description |
SuperFamily | SSF101936 | 8.63E-14 | 5 | 78 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 4.3E-12 | 6 | 75 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 7.5E-9 | 7 | 74 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence Send to blast |
MTYIKNQGDV ILTGPNGRYW SSEFKMRTVK TKNPGPRICN GWREFAKGYN LEIGDVCIFE 60 LLDGIQTTFE VSIVRFAEYE CCQWSQDSKY ANGGSKAYKD VKVKIEIE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2P5FXZ3 | 5e-32 | A0A2P5FXZ3_TREOI; B3 DNA binding domain containing protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF16088 | 5 | 9 |