PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK21144.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family TALE
Protein Properties Length: 646aa    MW: 72819.8 Da    PI: 6.2296
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK21144.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.46.8e-104154521954
                HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
   Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                Fe   ++yp+++e+  LAk++gLt++qV +WF N R +
  PK21144.1 415 FEHflHPYPKESEKVVLAKQTGLTTKQVANWFINARVR 452
                664459******************************88 PP

2BELL108.54.1e-35281352172
       BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                e+q+lq+kk+kL+s+l+ +d++Ykqy++q+qtv+s  + vag g+a+pYtslA+k+iSrhFrcL+d i++qi
  PK21144.1 281 EQQDLQSKKSKLMSMLDDIDRKYKQYYNQMQTVVSFLDNVAGRGAAEPYTSLAQKTISRHFRCLRDGISGQI 352
                6899******************************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005747.9E-47205350IPR006563POX domain
PfamPF075265.5E-43215349IPR006563POX domain
PROSITE profilePS5007112.228393456IPR001356Homeobox domain
SMARTSM003895.6E-9396460IPR001356Homeobox domain
CDDcd000863.67E-11396457No hitNo description
SuperFamilySSF466893.46E-17397463IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-27399462IPR009057Homeodomain-like
PfamPF059203.2E-17413452IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048510Biological Processregulation of timing of transition from vegetative to reproductive phase
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 646 aa     Download sequence    Send to blast
MATYVPNQSL NKKCDLASST TTAAYHENDH EAFVTSLNQS TSPTEPFSMS FHGSSNYCVD  60
SSQGRNEMMF IPTIATDSVL NGDSLADHQN NNLHYQGQGL SLSLGKQIHE SPVSLTSFLH  120
DNQYHYSSNP SLSSDHMGTC LTSNNMGMGL GTNQQNVESF NIMASGFLGI NNNNSIKTEC  180
FGNQIMHQSE RYHDQYDQPS YGFNNNNNNN GLNFKYLKAV QELLDEVVNV RKALNKNQNN  240
HKFQGIGSDH GLKESDLKSN TQSADPSEST ANSSCELSQT EQQDLQSKKS KLMSMLDDID  300
RKYKQYYNQM QTVVSFLDNV AGRGAAEPYT SLAQKTISRH FRCLRDGISG QIQAIQRRLG  360
EQDNGQNTAI PRLRYVDLKL RQQRGFNQLA AMRHAWRPQR GLPETSVSIL RAWLFEHFLH  420
PYPKESEKVV LAKQTGLTTK QVANWFINAR VRLWKPMVEE MYKEEFNDLE MNSKEGGEGG  480
GGGGRVDSSC EEDKIRGEYL NPLETHQNRR LRHETNVTDS ETTKSPVDNN AGFYLEEDEA  540
VRTSTTANTT TNQNHQNQAS YDDISELSSI VVRNDRHVSL ALELRHCESE GFSTLGGSHN  600
MRGDDESASQ ASLDYHCLET EQQERRRFSS NPHLLHDFVV CHLKNX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A4e-17402460563Homeobox protein Meis2
4xrm_B4e-17402460563Homeobox protein Meis2
4xrs_A4e-17402459158Homeobox protein Meis1
4xrs_B4e-17402459158Homeobox protein Meis1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010110017.10.0BEL1-like homeodomain protein 7
TrEMBLA0A2P5EZK20.0A0A2P5EZK2_TREOI; Homeodomain transcription factor
STRINGXP_010110017.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21463179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75410.21e-103BEL1-like homeodomain 3