PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK20621.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family G2-like
Protein Properties Length: 544aa    MW: 59599.3 Da    PI: 7.319
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK20621.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.17.4e-32318373156
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  PK20621.1 318 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 373
                68****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.045315375IPR017930Myb domain
SuperFamilySSF466897.47E-17316376IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.6E-28316376IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-26318373IPR006447Myb domain, plants
PfamPF002491.0E-6320371IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009266Biological Processresponse to temperature stimulus
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010452Biological Processhistone H3-K36 methylation
GO:0048579Biological Processnegative regulation of long-day photoperiodism, flowering
GO:1903507Biological Processnegative regulation of nucleic acid-templated transcription
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    Send to blast
MASPSELSLE CKPAHSYSML LKSFGEHQHQ QHHHLQQQQQ QQHQVPHQHD HTHKLEDYLN  60
RLEEERLKID AFKRELPLCM QLLTNAVEAS RQQLQTYRAN QGPIRPVLEE FIPLKTSSSE  120
GSADQKITNA PDNKANWMTS AQLWSQTSSN DGSKPQPTNN INNSTNNNSV TTKEGDISFN  180
VVSSSPKLAL DNKLSQRLNG PAGAFLPFSK DNINNRTNNQ SFRPLPELAL SASVADQKDI  240
IVGEENHKCS SEAERRENSG NNNGNCGGVI VEMGKGGVAG NNNCSNINGS DHHHQGVQTI  300
NTNNNSSSTS NNNQAHRKAR RCWSPDLHRR FVNALQMLGG SQVATPKQIR ELMKVDGLTN  360
DEVKSHLQKY RLHTRRPSPS PQAAGAPAPQ LVVLGSIWVP PEYAAAAAHS GAQTTLYSSH  420
AASHAPPPHY CASPVPQDFY ASQAHHQAQA QAQAQGVPHH QLHHHHALHH QLQMYKATSQ  480
THSSPETDGR GAAGGDRSES IEDGKSESSS WKGESGDNGG ERKGLAALRE EGEESNGSEI  540
TLKF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-13318371255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-13318371255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-13318371154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-13318371154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-13318371154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-13318371154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-13318371255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-13318371255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-13318371255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-13318371255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-13318371255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-13318371255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00261DAPTransfer from AT2G03500Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098958.10.0myb family transcription factor EFM
TrEMBLA0A2P5AZB10.0A0A2P5AZB1_TREOI; GARP transcription factor
STRINGXP_010098958.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54663455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.11e-94G2-like family protein