PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK19741.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family BES1
Protein Properties Length: 320aa    MW: 34253.3 Da    PI: 8.9876
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK19741.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822221.61.6e-6851481148
     DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslks 100
                ++sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqGnyklpk++DnneVlkALc eAGwvvedDGttyrkg++p+ + +++++s+++s +ss+q s++s
  PK19741.1   5 ASSGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGNYKLPKHCDNNEVLKALCSEAGWVVEDDGTTYRKGTQPP-AVDIGVASTNISACSSVQPSPQS 103
                589*************************************************************************.*********************** PP

     DUF822 101 salaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148
                s+++spv+sy+asp+sssfpsp+++d +++   + llp+l++ ++++ 
  PK19741.1 104 SSFPSPVPSYHASPSSSSFPSPTRFDANPS---NYLLPFLRNIAAIPT 148
                ****************************88...599999999887655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.0E-646130IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MTGAASSGRL PTWKERENNK RRERRRRAIA AKIYSGLRAQ GNYKLPKHCD NNEVLKALCS  60
EAGWVVEDDG TTYRKGTQPP AVDIGVASTN ISACSSVQPS PQSSSFPSPV PSYHASPSSS  120
SFPSPTRFDA NPSNYLLPFL RNIAAIPTNL PHLRISNSAP VTPPLSSPTS RGSKPKPDWE  180
ALSNGSLQAL RHPLFAASAP SSPTRRHHLT HATIPECDES DASTVDSGRW VSMQTAGGAP  240
SSVAPPSPTF NLIKPVAQQS ILQDAVGGHG PVGWGIPAEM ARGPEFDFEN GRVKPWEGER  300
IHDIAVDDLE LTLGSGKARC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-24979372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-24979372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-24979372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-24979372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024020611.11e-160BES1/BZR1 homolog protein 2
SwissprotQ94A431e-115BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A2P5FXR81e-165A0A2P5FXR8_TREOI; BZR transcription factor
STRINGXP_009349751.11e-156(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.22e-86BES1 family protein