PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PK19296.2

Organism

Cannabis sativa

Taxonomic ID

3483

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis

Family

BES1

Protein Properties

Length: 203aa MW: 22175.8 Da PI: 10.0251

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PK19296.2	genome	CCBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	144.6	9e-45	11	152	1	134
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas.......aspess 93 gg++r ++ +E+E++k+RER+RRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ s+p+ + +a+++s+ a p+ PK19296.2 11 GGARRCRPLEEKERTKLRERHRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQPQGSRHAVVNSTVatsssghAAPQQT 110 6899******************************************************************999999444444443331111111222222 PP DUF822 94 lq.sslkssalaspvesysaspksssfpspssldsislasaa 134 l +++ + +s v+ ++++k + +p +s +d ++a ++ PK19296.2 111 LPsLKACAAGYQSSVDFNANRMKGVYMPCSSPYDISTSARSQ 152 221333334568888888899999999999998887766443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.1E-40	13	137	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence Send to blast
XVQEVSTPGG GGARRCRPLE EKERTKLRER HRRAITAKIL AGLRRHGNYN LRVRADINDV 60 IAALAREAGW VVLPDGTTFP SRSQPQGSRH AVVNSTVATS SSGHAAPQQT LPSLKACAAG 120 YQSSVDFNAN RMKGVYMPCS SPYDISTSAR SQTSTMVGDG GEQTESHPHI VGSIDPIDDK 180 QFSILFYRLL IYLRSYQSVI FLA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010105937.1	3e-92	beta-amylase 7
Swissprot	O80831	4e-54	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A2P5F2Q7	6e-96	A0A2P5F2Q7_TREOI; Beta-amylase
STRING	XP_010105937.1	1e-91	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF19853	4	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	2e-40	beta-amylase 7

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]