PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK14093.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | bHLH | ||||||||
Protein Properties | Length: 363aa MW: 40491.3 Da PI: 5.0709 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.6 | 6.1e-10 | 321 | 362 | 6 | 51 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 +++Er+RR ri +++ +L++l P+ +k + a++Le++v+YI PK14093.1 321 SIAERNRRTRISERIRRLQDLCPNM----DKQTNTADMLELVVDYI 362 689*********************7....688*************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.656 | 315 | 363 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.09E-10 | 318 | 362 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.83E-9 | 319 | 362 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 3.2E-9 | 320 | 362 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.4E-4 | 321 | 363 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.7E-7 | 321 | 362 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MSLLYSPNFK RSEVEMGKNY PEFMDLSFDQ NQEESSTLTR YCSAPGSFLA TLMENSGNND 60 NDAAVEGGSE EDYRDLRSSS PEVETMLERF ISACNGSDNI GERSSMKQEP KDYSKNGSQA 120 PQIHSIHRLN SVDSNLESSF GVFNSKGLVN SLQPKMGPPN DDRSNLLRQS SSPAGFFSAL 180 ASENSFDAMR GGSRVDTQLN FSSGSASCSR RMPQISENGS DEVGIENGGE YLPSFPTDSW 240 DESAFSGLKR SRDHNDVKIF STSSDFEMES TDFGNCSRGL THHLSLPKNF EMAPREKVLH 300 FQGSVPCKMR AKRGYATHPR SIAERNRRTR ISERIRRLQD LCPNMDKQTN TADMLELVVD 360 YIX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015887981.1 | 1e-120 | transcription factor bHLH130-like | ||||
TrEMBL | A0A2P5EL28 | 1e-175 | A0A2P5EL28_TREOI; Basic helix-loop-helix transcription factor | ||||
STRING | XP_004308213.1 | 1e-103 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4005 | 33 | 59 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 7e-36 | bHLH family protein |