PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK14089.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family TALE
Protein Properties Length: 650aa    MW: 70970.8 Da    PI: 7.2203
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK14089.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.82e-094234601954
                HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
   Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                Fe   ++yp+ +++  LAk++gL+ +qV++WF N R +
  PK14089.1 423 FEHflHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVR 460
                554459******************************88 PP

2BELL106.12.4e-34290357572
       BELL   5 lqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 +kkk++L+s+l+eV++rYkqy++q+qtv+ sFe vaglg+a+pY++lA ka+++hF+cLk ai++q+
  PK14089.1 290 SRKKKSRLISMLDEVYRRYKQYYQQMQTVVTSFEYVAGLGNAAPYANLAVKAMTKHFKCLKSAIMDQL 357
                689**************************************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005743.8E-50214355IPR006563POX domain
PfamPF075263.8E-39219353IPR006563POX domain
PROSITE profilePS5007112.098401464IPR001356Homeobox domain
SMARTSM003893.4E-10404468IPR001356Homeobox domain
CDDcd000864.42E-13404465No hitNo description
SuperFamilySSF466895.56E-17406471IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-27407468IPR009057Homeodomain-like
PfamPF059201.2E-18421460IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010089Biological Processxylem development
GO:0010154Biological Processfruit development
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048457Biological Processfloral whorl morphogenesis
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 650 aa     Download sequence    Send to blast
EPYHVPQQSR RDKLRVVATH SSTNPASACI DAATANFHGS GGGLLPLATS YDPTSSDFLS  60
CTKEEGVVNL MGLVNGSSSS GSRNPFMDPM TSIQDINTNP FLFSSQALQS FRDFENQQGF  120
NNNAVFKPEP LSLSLSSHHD PTRIQNNTNN NNHHQLPLEL NLQRFGSAFY GGGGGGGSTT  180
NNNANTVTLA VVGGGSVADD GVGSRSSVPL GPFTGYSSIL KGSRFLKPAQ QLLEEFCNVG  240
GGSRVVYGDE LAADPTLMES PVEGLSSGSG GVNVDDVELS SGISDGGESS RKKKSRLISM  300
LDEVYRRYKQ YYQQMQTVVT SFEYVAGLGN AAPYANLAVK AMTKHFKCLK SAIMDQLQFS  360
NKDNCHTNHH GKEEVPTFRN SNRGNLYSQR PIQGSGFLDH QPVWRPQRGL PERAVTVLRA  420
WLFEHFLHPY PTDTDKLMLA KQTGLSRSQV SNWFINARVR LWKPMVEEIH MLETRQAQKA  480
SHREDRNTMR PNAQEHVASS ANNLASENPS TSMHRVHDTT LKRSRSDVPN VMDSTAGGVS  540
EEMNMSYDNL PTHLHNHHHH HHQVGVAANA MNMSGIGSNG VSLTLGLHQN NGGTIGLSEP  600
FPINAAQRFG LGLEGNNEGY VMGAFETQNR HFGRDHHHVM GGQLLHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A2e-16410468563Homeobox protein Meis2
4xrm_B2e-16410468563Homeobox protein Meis2
4xrs_A2e-16410467158Homeobox protein Meis1
4xrs_B2e-16410467158Homeobox protein Meis1
5bng_A2e-16410468159Homeobox protein Meis2
5bng_B2e-16410468159Homeobox protein Meis2
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010654234.10.0PREDICTED: BEL1-like homeodomain protein 9
TrEMBLA0A2P5CFU70.0A0A2P5CFU7_PARAD; Knotted like homeodomain transcription factor
STRINGVIT_08s0007g01290.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28103373
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.12e-98TALE family protein