PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK13537.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | TALE | ||||||||
Protein Properties | Length: 725aa MW: 79365 Da PI: 7.701 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.2 | 1.6e-09 | 420 | 457 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + PK13537.1 420 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 457 554459******************************88 PP | |||||||
2 | BELL | 124.3 | 4.8e-40 | 282 | 353 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vissFe++ag+gsa+ Yt+lAl++iS++FrcLkdai++qi PK13537.1 282 ERQEIQMKKAKLITMLDEVEQRYRQYHHQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQI 353 79*********************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 5.6E-66 | 203 | 351 | IPR006563 | POX domain |
Pfam | PF07526 | 8.9E-51 | 208 | 350 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.309 | 398 | 461 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.04E-11 | 401 | 462 | No hit | No description |
SMART | SM00389 | 5.3E-9 | 401 | 465 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 9.41E-17 | 402 | 467 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.1E-28 | 404 | 467 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 3.0E-18 | 418 | 457 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009610 | Biological Process | response to symbiotic fungus | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010197 | Biological Process | polar nucleus fusion | ||||
GO:0010201 | Biological Process | response to continuous far red light stimulus by the high-irradiance response system | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 725 aa Download sequence Send to blast |
MATYFHGNSD IQAPDGGLQT LVLMNPGGYI PYSDTPPPPS ATGNLIFLNS AANSLAQHHP 60 NISHAPQSHQ QTTQQFVTAI PSPHHHHHHH QQDPNNSQQS MQQQTQQHDF SALHGFMPRV 120 QYNLWNSPDQ SAAARETPRS QQQGGLSLTL SSQQLGGFGS FRSDREIPSP VQTQGQGPAV 180 SGEDMRVSGG SSSSVSGVTN GVPGIQSVLL SSKYLKAAQE LLDEVVNVGN EMRNEPFSKK 240 GTNSSQQSKP AGESSAAASG DGSPIATGET SGKRASELTP AERQEIQMKK AKLITMLDEV 300 EQRYRQYHHQ MQIVISSFEQ AAGIGSARTY TALALQTISK QFRCLKDAIT GQIRAANKSL 360 GEEDCLNGAG KIEGSRLKYV DHHLRQQRAL QQLGMIQQNA WRPQRGLPER SVSVLRAWLF 420 EHFLHPYPKD SDKHMLAKQT GLTRSQVSNW FINARVRLWK PMVEEMYLEE IKEHEKNGSA 480 EKNSKSNEDS DSKSTTPKEK SPAVDNQTGS FNSKQENSIA QFVPSAISMS TSSTSPTGIN 540 NHRNHSGFSL IGSSELDGIT QGSPKKQRNT ETLPSPNSYP SINMDVKPGK ITNEQISMKF 600 GEDQRQSRDG YSFMGNQTNF IGGFGQYPMA EIGRFDAEQF APRYSGNGVS LTLGLPHCEN 660 LSLAGAHQAF VPNQGIQLGR RVDIGEQNEF GAMNSPTPHS SAAFENINIQ NPKRFAAQLL 720 PDYVA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 6e-16 | 407 | 465 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 6e-16 | 407 | 465 | 5 | 63 | Homeobox protein Meis2 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015868214.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015868215.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015868216.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015868217.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015868218.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900418.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900419.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900420.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900421.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900422.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_015900424.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Swissprot | Q9SJ56 | 0.0 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A2P5FI18 | 0.0 | A0A2P5FI18_TREOI; Homeodomain transcription factor | ||||
STRING | EMJ05449 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1627 | 34 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-162 | BEL1-like homeodomain 1 |
Publications ? help Back to Top | |||
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