PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK10583.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family B3
Protein Properties Length: 259aa    MW: 29963.3 Da    PI: 10.1186
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK10583.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.28.3e-201722561099
                HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                +++s +l+lp++f+++h g+k++   ++     +r+W+vkl   ++ ++++++kGW  F +an +++gD ++F++++r++++l+v+++r+
  PK10583.1 172 TGRSYNLRLPNSFIKSHLGSKTQ---IISLKVGSRKWDVKL--LNCECGFFFSKGWAAFLEANSVNTGDACIFEFVSREQASLKVSIIRN 256
                345578***********767655...55556688*******..********************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508639.996165IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.4E-7366IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.31E-6367IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.8E-19155257IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.94E-17158257IPR015300DNA-binding pseudobarrel domain
CDDcd100171.80E-14161255No hitNo description
SMARTSM010191.2E-10162257IPR003340B3 DNA binding domain
PROSITE profilePS5086314.24163257IPR003340B3 DNA binding domain
PfamPF023621.2E-17164256IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
SSVSLALPCG HTWKIGLVRR DNKIFLQKKW PKFVQHYGII KINRHLLIFD YRGNSKFDVS  60
ITDETSCEID YTHFPFHSDE KKIDKAPVIR LTSSEECSSN SDSDSVSNSV YEAKFMISAE  120
TKDDTLKKMK QGKRRRHEGP YNKYTDTKAY KEASQFYSKY PFFKRIIRMD KTGRSYNLRL  180
PNSFIKSHLG SKTQIISLKV GSRKWDVKLL NCECGFFFSK GWAAFLEANS VNTGDACIFE  240
FVSREQASLK VSIIRNNRV
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-14B3 family protein