PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PK09321.2

Organism

Cannabis sativa

Taxonomic ID

3483

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis

Family

STAT

Protein Properties

Length: 686aa MW: 77068.6 Da PI: 5.1928

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PK09321.2	genome	CCBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	180.7	2.1e-56	216	336	1	121
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypflea 100 ldvv+l++ qpv+k++evvasL+y d+g++ve+++d eapLL+s+dG+ef+s+d+p+kll+GrasfklkisqLsskc nrLf+i+f++p+++ ypf+ea PK09321.2 216 LDVVFLDTSDQPVSKEIEVVASLVYLDNGAPVERTSDGEAPLLASFDGIEFASYDKPSKLLHGRASFKLKISQLSSKCQNRLFCIRFHLPNMEIYPFFEA 315 89************************************************************************************************ PP STAT 101 vskpirCisrsrntrsssltk 121 +s pir isr+rntr ss++ PK09321.2 316 FSPPIRSISRNRNTRVSSTMS 336 *************999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF49899	5.74E-6	19	165	IPR013320	Concanavalin A-like lectin/glucanase domain
Gene3D	G3DSA:3.30.505.10	2.7E-6	601	677	IPR000980	SH2 domain
SuperFamily	SSF55550	2.66E-8	603	682	IPR000980	SH2 domain
PROSITE profile	PS50001	9.589	608	686	IPR000980	SH2 domain

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence Send to blast
MERDNYLALK DLRLEIERED ENFSVCFWIY LTNSTAFPVT LLQKVPQDGS GHSPFLVINE 60 KEVMLFPLLP LNNEAQNSSN PASSSEVPCA SVETEFPLEK WVHFGCEVLT DCILLHIDGE 120 CVGEKSLSSI SEKDCAVNSP GKITLVGGGG DEANEQGYIY KLEILRTTSS IKDHFAKDPP 180 VQLSIDKSSA SEIEECQGGV WSIIGGKASC RRNFSLDVVF LDTSDQPVSK EIEVVASLVY 240 LDNGAPVERT SDGEAPLLAS FDGIEFASYD KPSKLLHGRA SFKLKISQLS SKCQNRLFCI 300 RFHLPNMEIY PFFEAFSPPI RSISRNRNTR VSSTMSKRSN SVPHQVSQSH GVDEDMMDVD 360 QNSSHETKPN PSSKRSKLGQ DRISTTFRVD PTLEAHDDEC NSHTKTAHNK VEDTLMTSST 420 VDPDNFDEDN SSTDSESIEA RNSAPKSTSS SRNPIPDATI FKYCLAGLAE RSLLLKEIAN 480 SASNKELLDF ANQVSLYSGC SHHRNQIIMA KRLVEEGKKA WNSISPNNNR VQWECVVFVI 540 EEHFMKIACC SSRSLTQQDF NLLKRIAGCE EYLTQENFER MWCWLYPVAY TLSRDWINTA 600 WSSTSPRWIE GFITKEEAEL SLQGPKGFQE PGTFILRFPT SRSWPHPDAG SLVVTYIGSD 660 YTLHHKLLSL DHLYRFVIHY LLSCYC

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence Send to blast

MERDNYLALK DLRLEIERED ENFSVCFWIY LTNSTAFPVT LLQKVPQDGS GHSPFLVINE  60
KEVMLFPLLP LNNEAQNSSN PASSSEVPCA SVETEFPLEK WVHFGCEVLT DCILLHIDGE  120
CVGEKSLSSI SEKDCAVNSP GKITLVGGGG DEANEQGYIY KLEILRTTSS IKDHFAKDPP  180
VQLSIDKSSA SEIEECQGGV WSIIGGKASC RRNFSLDVVF LDTSDQPVSK EIEVVASLVY  240
LDNGAPVERT SDGEAPLLAS FDGIEFASYD KPSKLLHGRA SFKLKISQLS SKCQNRLFCI  300
RFHLPNMEIY PFFEAFSPPI RSISRNRNTR VSSTMSKRSN SVPHQVSQSH GVDEDMMDVD  360
QNSSHETKPN PSSKRSKLGQ DRISTTFRVD PTLEAHDDEC NSHTKTAHNK VEDTLMTSST  420
VDPDNFDEDN SSTDSESIEA RNSAPKSTSS SRNPIPDATI FKYCLAGLAE RSLLLKEIAN  480
SASNKELLDF ANQVSLYSGC SHHRNQIIMA KRLVEEGKKA WNSISPNNNR VQWECVVFVI  540
EEHFMKIACC SSRSLTQQDF NLLKRIAGCE EYLTQENFER MWCWLYPVAY TLSRDWINTA  600
WSSTSPRWIE GFITKEEAEL SLQGPKGFQE PGTFILRFPT SRSWPHPDAG SLVVTYIGSD  660
YTLHHKLLSL DHLYRFVIHY LLSCYC

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024028241.1	0.0	SH2 domain-containing protein A
TrEMBL	A0A2P5D936	0.0	A0A2P5D936_PARAD; STAT transcription factor
STRING	XP_010106738.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6710	30	36

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	SH2 domain protein B