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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PK09138.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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| Family | B3 | ||||||||
| Protein Properties | Length: 187aa MW: 21651.8 Da PI: 6.3607 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 33.1 | 9.9e-11 | 4 | 61 | 37 | 98 |
EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
+l +sg+ Wev+l +k +++++++ GW+eFv+ + g ++F+++g+sef +v +++
PK09138.1 4 KLIVPSGQFWEVRL--EKVDNKIWFKHGWQEFVNFYSISYGNLLIFRYEGESEF--HVCILN 61
677899********..*********************************99999..998876 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS50863 | 12.619 | 1 | 63 | IPR003340 | B3 DNA binding domain |
| CDD | cd10017 | 9.46E-11 | 2 | 61 | No hit | No description |
| SuperFamily | SSF101936 | 1.71E-14 | 3 | 62 | IPR015300 | DNA-binding pseudobarrel domain |
| Gene3D | G3DSA:2.40.330.10 | 8.4E-14 | 4 | 62 | IPR015300 | DNA-binding pseudobarrel domain |
| Pfam | PF02362 | 2.3E-7 | 7 | 61 | IPR003340 | B3 DNA binding domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 187 aa Download sequence Send to blast |
XVAKLIVPSG QFWEVRLEKV DNKIWFKHGW QEFVNFYSIS YGNLLIFRYE GESEFHVCIL 60 NNTFTEIDYP IPLNDLSSNF VDPNLDNEIH LQLPHSSSKT RIVNKLGDKQ VFKRVQTPLS 120 NPKTERSNKI FRTNAASIDC TKASRAVKTE EETPVEQSGY ANVPRSSAKM EKEENFFLNH 180 EENTNLX |
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF21791 | 3 | 4 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G18990.1 | 9e-22 | B3 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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