PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK05128.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 433aa    MW: 46628 Da    PI: 4.9514
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK05128.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.21.3e-16223279359
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L  eN++L k+l   ++++ + 
  PK05128.1 223 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSTLLKRLTDVSQKYNEA 279
                68******************************************9999998888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.6E-12221277No hitNo description
SMARTSM003388.6E-20221285IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.496223278IPR004827Basic-leucine zipper domain
PfamPF001705.6E-14224276IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.29E-11225275No hitNo description
CDDcd147028.08E-7226277No hitNo description
PROSITE patternPS000360228243IPR004827Basic-leucine zipper domain
PfamPF124989.5E-29292394IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MDRVYSVDEI SDWPPPPSSS TSGDEGLKMN RSASEWAFQR FLQETSGSVT SLQPQPQPQP  60
QPQSQPPLPP LPPPPSFSAA DENEVVEVKA KDNLKPSGAP LSSSCIPVDS EDYQAFLKSK  120
LNLACAAVAM SRGGLGNVQD SATSADCGSI TSVTQAPSKG AGYDLSRSQD KDANGSHGSP  180
TLNIHKSSVV SLRPATSGSS REHSDDDELE GETEITENMD PADVKRVRRM LSNRESARRS  240
RRRKQAHLTE LETQVAQLRV ENSTLLKRLT DVSQKYNEAA VDNRVLKADV ETLRAKVKMA  300
EEMVKRITGS NLFNTMSEIS SMDMPSFDGS PSDTSTDAAV PVQENPNHQF YESSHPVTTP  360
QETKSNNNGS AEIPAAVEKG QQQRSTAGGK MGRXTIDAAS GELGASAEED SWMSKRAPSP  420
QWRAAAVGTG EHN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237244RRSRRRKQ
2239244SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024025188.11e-152light-inducible protein CPRF2
SwissprotQ990901e-99CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2P5ENN31e-171A0A2P5ENN3_TREOI; Basic-leucine zipper transcription factor
STRINGXP_009610430.11e-124(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.25e-64bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]