PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK03930.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family BES1
Protein Properties Length: 325aa    MW: 34665.8 Da    PI: 8.5556
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK03930.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822210.54.4e-6521461150
     DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslks 100
                ++++r ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve DGttyrkg+kp e+++++g sa +sp+ss++     
  PK03930.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVELDGTTYRKGCKPAERMDVVGGSAATSPCSSYH----- 96 
                5899*******************************************************************************************..... PP

     DUF822 101 salaspvesysaspksssfpspssldsislasa...asllpvlsvlslvsssl 150
                   +sp +sy++sp sssfpsp+s++ + ++ +   +sl+p+l++ls++sss+
  PK03930.1  97 ---PSPYASYNPSPGSSSFPSPASSSYAAANPNgdgNSLIPWLKNLSSASSSA 146
                ...*******************99988776655888**********9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.6E-653140IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVELDGTTY RKGCKPAERM DVVGGSAATS PCSSYHPSPY ASYNPSPGSS SFPSPASSSY  120
AAANPNGDGN SLIPWLKNLS SASSSASSSK LSHLYSHGGS ISAPVTPPLS SPTARTPRIK  180
TDWEANLTRP AWGGQLCSFQ PSSMPPSPGR QIVDPEWFSG IRIPQGGPHS PTFSLVAPNP  240
FGSKDDVMAG GGSRMCTPGQ SGTCSPAIAA GSDLNADIPM AEVIYDEFAF GGHMTGLVKP  300
WQGERIHEEC GVDDLELTLG SSKTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-22676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024019453.11e-176BES1/BZR1 homolog protein 4
RefseqXP_024019454.11e-176BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-127BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2P5D9B01e-169A0A2P5D9B0_PARAD; BES1/BZR1 transcription factor
STRINGEOY133911e-163(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.16e-99BES1/BZR1 homolog 4