PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK03633.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | G2-like | ||||||||
Protein Properties | Length: 339aa MW: 37661 Da PI: 7.1198 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.9 | 2e-32 | 10 | 64 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt+eLH+rFv+a++qLGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl PK03633.1 10 KPRLKWTSELHQRFVDAINQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 64 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-30 | 8 | 66 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.79E-16 | 9 | 65 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.2E-23 | 10 | 65 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.6E-7 | 12 | 63 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 3.2E-23 | 114 | 160 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MNLVLSTDAK PRLKWTSELH QRFVDAINQL GGADKATPKS LMRVMGIPGL TLYHLKSHLQ 60 KYRLGKSQQS EACSDNKQEG SFNGSDFKEI QGSDGHFNGE INDGTQSQMN EGLHIAQALQ 120 LQMEVQRKLH EQLEVQRHLQ LRIEAQGKYL QSVLKKAQET LAGYSSSSVG VELTKAELSR 180 LLSMVNNGCP SSSFSEITET RDLSLEGIER KQMRGTMCSM ESSLTSSESS GREEEKKPMD 240 NNGDPQKSST NTIELQLMEV HPEHNLRNNA TSNQVSGRKR NGGTMSDGIS VEQPNSKRSP 300 THLDKNSNHL RKYGLVGTFD LNSQYQNDID SGPKAIDLN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 7e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 6e-19 | 10 | 66 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 6e-19 | 10 | 66 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 6e-19 | 10 | 66 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 6e-19 | 10 | 66 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-19 | 9 | 66 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015895130.1 | 0.0 | myb family transcription factor PHL8 isoform X1 | ||||
Swissprot | F4I274 | 1e-85 | PHL8_ARATH; Myb family transcription factor PHL8 | ||||
TrEMBL | A0A2P5AEU9 | 0.0 | A0A2P5AEU9_TREOI; Octamer-binding transcription factor | ||||
STRING | XP_010108678.1 | 1e-171 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5218 | 32 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69580.1 | 4e-87 | G2-like family protein |
Publications ? help Back to Top | |||
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