PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK03633.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family G2-like
Protein Properties Length: 339aa    MW: 37661 Da    PI: 7.1198
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK03633.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.92e-321064155
    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               kprl+Wt+eLH+rFv+a++qLGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl
  PK03633.1 10 KPRLKWTSELHQRFVDAINQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 64
               79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-30866IPR009057Homeodomain-like
SuperFamilySSF466891.79E-16965IPR009057Homeodomain-like
TIGRFAMsTIGR015574.2E-231065IPR006447Myb domain, plants
PfamPF002491.6E-71263IPR001005SANT/Myb domain
PfamPF143793.2E-23114160IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MNLVLSTDAK PRLKWTSELH QRFVDAINQL GGADKATPKS LMRVMGIPGL TLYHLKSHLQ  60
KYRLGKSQQS EACSDNKQEG SFNGSDFKEI QGSDGHFNGE INDGTQSQMN EGLHIAQALQ  120
LQMEVQRKLH EQLEVQRHLQ LRIEAQGKYL QSVLKKAQET LAGYSSSSVG VELTKAELSR  180
LLSMVNNGCP SSSFSEITET RDLSLEGIER KQMRGTMCSM ESSLTSSESS GREEEKKPMD  240
NNGDPQKSST NTIELQLMEV HPEHNLRNNA TSNQVSGRKR NGGTMSDGIS VEQPNSKRSP  300
THLDKNSNHL RKYGLVGTFD LNSQYQNDID SGPKAIDLN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-19966158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-19966158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A6e-191066157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-191066157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-191066157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-191066157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-19966158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-19966158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-19966158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-19966158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-19966158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-19966158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015895130.10.0myb family transcription factor PHL8 isoform X1
SwissprotF4I2741e-85PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A2P5AEU90.0A0A2P5AEU9_TREOI; Octamer-binding transcription factor
STRINGXP_010108678.11e-171(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52183253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.14e-87G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]