PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK03356.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | C2H2 | ||||||||
Protein Properties | Length: 258aa MW: 28245.9 Da PI: 10.4989 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.0004 | 192 | 211 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F ++ L++H++++ PK03356.1 192 CSQCGKAF-KPEKLHSHMKSC 211 ********.**********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
XHSTTTKKLE ISTPLFNNNK VKRSKNNNEL DDSMRAAGSS SFSSPSSSSK SVPLSAKRKS 60 FSGGASNVLK SFITCRAVDT NDTVLVTVKH HGGCSGGFQK STGSVKGNTK PNNNNNNEKD 120 DQYVFTGGRR SFHTCWKYQE FEVQQPQNYN ARRSCDERSS TTTSSSKKDQ QSEFSKQRTI 180 PSAYRAAREP NCSQCGKAFK PEKLHSHMKS CRGMKTLGNK SNANTSVNKS TVLYSHQGSS 240 ATSSYKESAL AHFLTSSS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024031523.1 | 8e-48 | protein UPSTREAM OF FLC, partial | ||||
TrEMBL | A0A2P5D3R2 | 1e-65 | A0A2P5D3R2_TREOI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF8378 | 16 | 20 |