PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK02343.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | Trihelix | ||||||||
Protein Properties | Length: 119aa MW: 13775.5 Da PI: 9.1858 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 25.9 | 2.6e-08 | 56 | 119 | 1 | 59 |
trihelix 1 rWtkqevlaLiearr..emeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnk 59 +W+k+ + +Li+ ++++ +++++ ++ W++++k+ +++ +r+ kqCk++w+++n+ PK02343.1 56 KWSKEATILLINRWLntSKDTIVESDQISAKFWDQIAKYFntnHKGEERRTGKQCKDRWNKINQ 119 7**********965511555555667778999********9955555577***********985 PP | |||||||
2 | Myb_DNA-binding | 21.6 | 5.1e-07 | 87 | 116 | 23 | 46 |
-HHHHHHHHT......TTS-HHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmg......kgRtlkqcksrwqk 46 W+ Ia++++ ++Rt+kqck+rw+k PK02343.1 87 FWDQIAKYFNtnhkgeERRTGKQCKDRWNK 116 6****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 7.306 | 49 | 118 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 9.5E-5 | 56 | 117 | IPR009057 | Homeodomain-like |
Pfam | PF13837 | 2.1E-7 | 56 | 118 | No hit | No description |
CDD | cd00167 | 0.00173 | 86 | 117 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence Send to blast |
MASKIYTPSM KKSSVDLNLE TSSTSVSVTQ PANCVERLEN VDLHNEEKPS QESKLKWSKE 60 ATILLINRWL NTSKDTIVES DQISAKFWDQ IAKYFNTNHK GEERRTGKQC KDRWNKINQ |