PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK01364.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | bHLH | ||||||||
Protein Properties | Length: 331aa MW: 36480.3 Da PI: 6.5196 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 48.2 | 1.9e-15 | 47 | 96 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + a+ L +++eY++ Lq PK01364.1 47 RSKHSVTEQRRRSKINERFQILRDLVPHS----DQKRDTASFLLEVIEYVQFLQ 96 889*************************9....8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.49E-18 | 43 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.4E-22 | 45 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.126 | 45 | 95 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.37E-14 | 47 | 100 | No hit | No description |
Pfam | PF00010 | 9.0E-13 | 47 | 96 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 7.6E-12 | 51 | 101 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MRTPAKGHHE EEEYEDDEYG SKKEGPSSNN NSNSKDAKNN DKASAVRSKH SVTEQRRRSK 60 INERFQILRD LVPHSDQKRD TASFLLEVIE YVQFLQEKVH KFEGSYQGWS AEPTKLIPWR 120 NSHWRVQNFV GHPPQNIKNG PAAAFPGKFD ESNISISPTM LTSPQNLVES DPSRDVACKT 180 LDRQPEAANK GVSLPIPTLA CMSTRTSDGM LTQPLQIPVE SQSTQCPTTS DGQNQPDEFM 240 VEGGTISVTS AYSQGLLNTL AQALQNAGLD LSQASISVQI DLGKRANKLL SSGTSVSKDY 300 ENVPSSNQTI GHRRDAGVGE DSDQGQKRLK T |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive brassinosteroid-signaling protein. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00219 | DAP | Transfer from AT1G69010 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024018285.1 | 1e-173 | transcription factor BIM2 | ||||
Swissprot | Q9CAA4 | 1e-112 | BIM2_ARATH; Transcription factor BIM2 | ||||
TrEMBL | A0A2P5DTX4 | 0.0 | A0A2P5DTX4_TREOI; Basic helix-loop-helix transcription factor | ||||
STRING | XP_010091635.1 | 1e-165 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1730 | 33 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 5e-87 | BES1-interacting Myc-like protein 2 |
Publications ? help Back to Top | |||
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