PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_8366_iso_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | EIL | ||||||||
Protein Properties | Length: 98aa MW: 11329.5 Da PI: 5.893 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 147.6 | 1.7e-45 | 13 | 97 | 119 | 205 |
XXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.- CS EIN3 119 lsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtp 193 l++++ ++++ss h l+e+qDTtlgSLLsalmqhc ppqrrfple+g++pPWWPtG+elwwge+g+++++g+p cra_locus_8366_iso_1_len_291_ver_3 13 LEEHE--NMDPSSFIHLLQEIQDTTLGSLLSALMQHCVPPQRRFPLERGLPPPWWPTGEELWWGEQGMAHEHGPP 85 44444..4589**************************************************************** PP ----GGG--HHH CS EIN3 194 pykkphdlkkaw 205 pyk phdlkkaw cra_locus_8366_iso_1_len_291_ver_3 86 PYKRPHDLKKAW 97 ************ PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.6E-44 | 2 | 97 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 3.0E-39 | 22 | 97 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.44E-34 | 25 | 97 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence Send to blast |
XPAAIAEFLP KILEEHENMD PSSFIHLLQE IQDTTLGSLL SALMQHCVPP QRRFPLERGL 60 PPPWWPTGEE LWWGEQGMAH EHGPPPYKRP HDLKKAWX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-35 | 26 | 97 | 4 | 75 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-35 | 26 | 97 | 4 | 75 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011090514.1 | 5e-51 | LOW QUALITY PROTEIN: putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
Swissprot | Q9FJQ5 | 8e-45 | EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein | ||||
TrEMBL | A0A2G9IAH0 | 9e-50 | A0A2G9IAH0_9LAMI; Uncharacterized protein | ||||
STRING | EOX92159 | 3e-50 | (Theobroma cacao) |
Publications ? help Back to Top | |||
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