PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_7421_iso_6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 150aa MW: 17398.9 Da PI: 11.043 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.1 | 1.1e-09 | 20 | 68 | 15 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +A rsR RK+++i++Le+ v++L+a +++ +ele l + l +e+ cra_locus_7421_iso_6_len_517_ver_3 20 QSAHRSRVRKLQYIAQLERTVQVLQATGSKMSSELEFLDHQNLILNMEN 68 59**********************************9998887777666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.5E-5 | 11 | 70 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 8.09E-12 | 11 | 61 | No hit | No description |
SuperFamily | SSF57959 | 1.13E-6 | 19 | 63 | No hit | No description |
Pfam | PF00170 | 1.6E-7 | 20 | 67 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.0E-7 | 20 | 64 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
RPGEAKPSVA KSDTKRAKQQ SAHRSRVRKL QYIAQLERTV QVLQATGSKM SSELEFLDHQ 60 NLILNMENRA LKQRLDSLSQ EQLIKQFEHE MLEREVGRLQ ALCRLQGQEQ QLKMQHQQQQ 120 PQINPKHRRT KSKDAIISSS RSPINGQLQI |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269|PubMed:17719007, ECO:0000269|PubMed:19449183}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027093525.1 | 8e-51 | basic leucine zipper 34-like | ||||
Swissprot | F4IN23 | 3e-22 | BZP34_ARATH; Basic leucine zipper 34 | ||||
TrEMBL | A0A068UQT9 | 5e-49 | A0A068UQT9_COFCA; Uncharacterized protein | ||||
STRING | XP_009765647.1 | 7e-44 | (Nicotiana sylvestris) |
Publications ? help Back to Top | |||
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