PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_69318_iso_2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 109aa MW: 12276.1 Da PI: 5.3388 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.4 | 8.3e-10 | 71 | 108 | 4 | 41 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 +k+ +r +NR AA +sR+RKk ++ Le k+ +e+e cra_locus_69318_iso_2_len_325_ver_3 71 DKKRKRQLRNRDAAVKSRERKKLYVRDLESKSRYFESE 108 899****************************9999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.5E-9 | 64 | 108 | No hit | No description |
PROSITE profile | PS50217 | 9.427 | 70 | 109 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.0E-8 | 71 | 108 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.43E-8 | 72 | 108 | No hit | No description |
CDD | cd14704 | 7.38E-11 | 73 | 108 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 75 | 90 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence Send to blast |
RPGIVYSEEA DPQFASEFLS DLLVDSPVQY PSGGLSDSKV SSGSEGNDDR KDKGKVSKSP 60 SDGEDNDDPV DKKRKRQLRN RDAAVKSRER KKLYVRDLES KSRYFESEX |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 91 | KRKRQLRNRDAAVKSRERKK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006342192.1 | 1e-37 | PREDICTED: bZIP transcription factor 60 | ||||
TrEMBL | B2CM16 | 2e-36 | B2CM16_SOLCH; BZIP transcription factor protein | ||||
STRING | PGSC0003DMT400025921 | 5e-37 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7101 | 21 | 28 |