PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_6451_iso_4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 563aa MW: 62388.3 Da PI: 9.8112 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.4 | 9.8e-11 | 383 | 441 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L +l l+k +l++++ cra_locus_6451_iso_4_len_1924_ver_3 383 KRAKRILANRQSAARSKERKLRYICELEHKVQTLQTEATTLSAQLTILQKDFTELTNQN 441 9****************************************************999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-16 | 379 | 443 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.749 | 381 | 444 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.0E-10 | 383 | 432 | No hit | No description |
SuperFamily | SSF57959 | 7.23E-11 | 383 | 439 | No hit | No description |
Pfam | PF00170 | 9.9E-10 | 383 | 441 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 8.94E-23 | 384 | 435 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 563 aa Download sequence Send to blast |
XGKKVSSVRK LDIQMRFDFF IQRVLLNHYC DIQGXRIRGF VQKRLYSGLV VKRFWMAQLN 60 AKQSVSQNYG LGGSHSRSSS QPQFFSNNCL PPLSPLHHSE SSLASSSSIK DVSMEEMDVS 120 SQGPASVGSS YRCENAFRGN FESLPPRKGH RRSNSDVPLG FNAMIQTSPQ LVPISGQGVL 180 GKSSSGNNKF ALDKPIRLQM LEMDTFSDTK NHVEGIGDRK LPGEVVEDLF QSYMNLEKTD 240 RFSGSSSGSI DKGSTFSSTK RSGGNITNNE GENISKRNDP AIEGMDAREG IKRSAAGDIA 300 PTPRHFRSLS VDSAFGNLNF GDESPKFPPS SGNGIGQFSP SNLMNENMAK LSLDYGNGEF 360 SDAEVKKIMS DERLAEIALS DPKRAKRILA NRQSAARSKE RKLRYICELE HKVQTLQTEA 420 TTLSAQLTIL QKDFTELTNQ NNELKFRLKA MEQQAQLRDA LHEALTGEVQ RLKLVAAEFT 480 ENGGSSSRTM QQMPMKHHML QMQQRHPSNQ RQQIPVSTSK TSTTSSATPA SAXSMAGNGA 540 DRYASFLDEY ENIFRISIKA CWH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027090093.1 | 0.0 | transcription factor RF2a-like isoform X1 | ||||
TrEMBL | A0A068UGL3 | 0.0 | A0A068UGL3_COFCA; Uncharacterized protein | ||||
STRING | XP_009610158.1 | 1e-168 | (Nicotiana tomentosiformis) |