PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_5936_iso_3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 588aa MW: 64277.9 Da PI: 7.0416 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.3 | 2.5e-11 | 422 | 480 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe kv++L++e ++L +l l+ +a l+s++ cra_locus_5936_iso_3_len_2440_ver_3 422 KRAKRILANRQSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTLLQRDSAGLTSQN 480 9****************************************************999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.8E-18 | 418 | 482 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.852 | 420 | 483 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.9E-10 | 422 | 480 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.2E-9 | 422 | 479 | No hit | No description |
SuperFamily | SSF57959 | 6.12E-11 | 422 | 473 | No hit | No description |
CDD | cd14703 | 9.14E-24 | 423 | 474 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 588 aa Download sequence Send to blast |
MGGDADEASS DMMQRLQSSF GTSSSSVPKQ PPMSMNQLDL SQLNSSQFRG QMRHFSPNFS 60 SESAKRVGIP PSHPQMPPIS PYSQIPVSRP VNQQMGMQNF GATPGPGPSH SRSLSQPSFF 120 SLDSLPPLSP SPYRESPSNS INEPVSTDVS MEDQNAGSQS LLPPSPFTRG HSSRAGESLP 180 PRKAHRRSNS DIPFGFSTIM QSSQPLMPLR SPGAPVSARE NSAAKPAQLV KRESCWEKGT 240 ETSAEGMGER KSEGEVVDDL FSAYMNLDNI DVLNSSGTDE KQGTDNREDL DSRASGTKTN 300 GGDSSDNEAT SSVNESGNSM QRSSEKREGI KRNAVGDIAP TSRHYRSVSM DSFMGKLNFG 360 EESPKLPPSP GTRPGQLSPT NSLDTNSNTF SLEFGNGEFS GAELKKIMAN EKLAEIALSD 420 PKRAKRILAN RQSAARSKER KMRYIAELEH KVQTLQTEAT TLSAQLTLLQ RDSAGLTSQN 480 NELKFRLQAM EQQAQLRDAL NEALTAEVQR LKLATTELNG DAAKFQQLSM NPQMFQLRQQ 540 QAAQLNMHQL QQQQHQQSQQ SQPSQQPQQQ QQQQQTGNAA APKNEPNQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027162353.1 | 0.0 | myb-like protein Z | ||||
Refseq | XP_027162354.1 | 0.0 | myb-like protein Z | ||||
TrEMBL | A0A068TM07 | 0.0 | A0A068TM07_COFCA; Uncharacterized protein | ||||
STRING | XP_009804619.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1265 | 24 | 78 |