PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_58492_iso_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 104aa MW: 11446.3 Da PI: 10.0997 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 22.2 | 3.2e-07 | 65 | 99 | 7 | 42 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 e +++k A rsR RK+++i++Le+ v++L++e cra_locus_58492_iso_1_len_310_ver_3 65 EAKRAK-QHNAHRSRVRKLQYIAHLERTVQNLQTEG 99 555555.33489********************9985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-5 | 74 | 101 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence Send to blast |
RPGGLQFKHG EIASMESKKV DEVSEEVGTT IAVEQRREEN SSKSPEGSAD RAGGSQAKPS 60 SSKTEAKRAK QHNAHRSRVR KLQYIAHLER TVQNLQTEGS EISX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096456.1 | 7e-26 | uncharacterized protein At4g06598-like isoform X1 | ||||
Refseq | XP_020554123.1 | 3e-26 | uncharacterized protein At4g06598-like isoform X2 | ||||
Refseq | XP_020554126.1 | 3e-26 | uncharacterized protein At4g06598-like isoform X2 | ||||
TrEMBL | A0A2G9GK01 | 3e-26 | A0A2G9GK01_9LAMI; Uncharacterized protein | ||||
STRING | Migut.C01294.1.p | 3e-23 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11445 | 20 | 23 |