PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_5720_iso_4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 320aa MW: 35329 Da PI: 7.6772 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.8 | 3.5e-11 | 178 | 223 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ cra_locus_5720_iso_4_len_1114_ver_3 178 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 223 899**********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.8E-14 | 174 | 238 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.68 | 176 | 228 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.1E-10 | 178 | 222 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-11 | 178 | 232 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.7E-14 | 178 | 229 | No hit | No description |
CDD | cd14703 | 4.58E-22 | 179 | 229 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 181 | 196 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence Send to blast |
MAQLPPKVPT MTQNWPSFPF QMMPFPSSST AAAAAAASSQ QNSSWVDEFL DFSSARRNSH 60 RRSVSDPIAF VEAPNNNGFE KLDDEQLRTM FSDDVAAMGL PTMSSSNPSS TNPSTPSDQN 120 SENDEKNAPP PLPLENQNLQ PKIEPGEVDS SCKIQIQSQP STNSSANNAS PDAIVDPKRI 180 KRILANRQSA QRSRVRKLQY ISELERSVTT LQTEVSALSP RVAFLDHQRL ILNVDNSALK 240 QRIAALAQDK IFKDAHQEAL RKEIERLRQI YHEQNMKKMS NKGTNEASQS PTAAAAAPAP 300 PPLLSNFNNN NNNNNXXXXX |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027062040.1 | 1e-131 | basic leucine zipper 61-like | ||||
Refseq | XP_027171406.1 | 1e-131 | basic leucine zipper 61-like | ||||
Swissprot | Q9M2K4 | 1e-109 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A2G9HTN5 | 1e-126 | A0A2G9HTN5_9LAMI; Uncharacterized protein | ||||
STRING | XP_009627193.1 | 1e-122 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1775 | 24 | 65 |
Publications ? help Back to Top | |||
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