PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_56316_iso_2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 93aa MW: 10894.9 Da PI: 4.4679 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 20.2 | 1.3e-06 | 2 | 35 | 20 | 53 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 20 sRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 sR RK++ +eeL +L+++N+ +++++ cra_locus_56316_iso_2_len_277_ver_3 2 SRMRKQQHVEELMSQLTQLQNQNTIWRERIDAVG 35 9***************************999765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.9E-5 | 2 | 33 | No hit | No description |
CDD | cd14702 | 1.26E-7 | 2 | 39 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 93 aa Download sequence Send to blast |
XSRMRKQQHV EELMSQLTQL QNQNTIWRER IDAVGRNYRG VDAENNVLRA QIAELTERLD 60 SLNSLTRFWA DANGFDVDIP EIPDTLLEPW QLP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009774669.1 | 2e-54 | PREDICTED: ocs element-binding factor 1-like | ||||
Refseq | XP_016485106.1 | 2e-54 | PREDICTED: bZIP transcription factor 53-like | ||||
TrEMBL | A0A2G3DI25 | 2e-53 | A0A2G3DI25_CAPCH; Uncharacterized protein | ||||
STRING | XP_009774669.1 | 6e-54 | (Nicotiana sylvestris) |