PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_5046_iso_3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | STAT | ||||||||
Protein Properties | Length: 744aa MW: 83123.8 Da PI: 7.1698 | ||||||||
Description | STAT family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | STAT | 206 | 2.9e-64 | 255 | 376 | 1 | 122 |
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqL 74 ldv+l+na+g+pv+k++evvasLlya++g++ve+++daeapLL+sydG+e++s+drp+kl+ GrasfklkisqL cra_locus_5046_iso_3_len_2375_ver_3 255 LDVILMNAFGHPVHKEIEVVASLLYANNGAPVEETNDAEAPLLTSYDGIEYASSDRPSKLISGRASFKLKISQL 328 8************************************************************************* PP STAT 75 sskcdnrLfrikfeipklkkypfleavskpirCisrsrntrsssltkk 122 sskcdnrLfrikfeipkl+ ypflea+s++irCisr+rn+r+ss+++k cra_locus_5046_iso_3_len_2375_ver_3 329 SSKCDNRLFRIKFEIPKLSGYPFLEAISHSIRCISRNRNARTSSMSWK 376 ********************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF49899 | 1.22E-5 | 47 | 173 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
Gene3D | G3DSA:3.30.505.10 | 2.4E-6 | 642 | 707 | IPR000980 | SH2 domain |
SuperFamily | SSF55550 | 1.12E-7 | 644 | 710 | IPR000980 | SH2 domain |
PROSITE profile | PS50001 | 10.36 | 648 | 705 | IPR000980 | SH2 domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 744 aa Download sequence Send to blast |
CKLVKKRGKG LVGFFGLLIK KLLEAGIMEV VNGIEEKDYI LLKNLRVELT DKVQEANGVF 60 SLCFWLYLSS NGLSVPSAIL HQEHPVTKLS VPFLLLNEKK KVVLFPLLFL HEEVSLTANL 120 TNWREVPCIS TELDLPLNKW VHVGFEVSQN VLLLHINGET AGEKSLTSSP NNDLRPGGMK 180 RLLLPSIIGD NHGCQAYVHC AEVLPLKLPI KNHYAKDPPI QLSIDSSSAS EIEEDSDGVW 240 SIVGGKASCR RNFSLDVILM NAFGHPVHKE IEVVASLLYA NNGAPVEETN DAEAPLLTSY 300 DGIEYASSDR PSKLISGRAS FKLKISQLSS KCDNRLFRIK FEIPKLSGYP FLEAISHSIR 360 CISRNRNART SSMSWKKSPS EVHLVNGSQS PGPNDGSSEL LHNVVCEAKQ SPSSKRIKLG 420 QEKPFAMFND ALTCKKVDEE CNSHACPNNE VDNVRETNFG GRPVNRGGSD NISSDSENSE 480 TTKSDPISML SERNIISDSI VFKYCLGGQS ERVHLLKEIA TSVRHTELAN FADQVSLFSG 540 CSHHRHQIMI AKRLIEDGAK VWNFIAKSNH HVLWENLVSG IKEHFTSMVS CTRSLTFQDL 600 QLLRRISGCQ ELVSQENFEK IWCWLYPVAF TLSQDWANGM WSSVTPKWIE GFITKEESES 660 LLQGPGGFQE PGTFVLRFPT SRSWPHPDAG NLVVTYISTD HTIRHRLLSL DFVYSSKSRN 720 VKSLQEMLLE EPELSHLRRT GSIH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027127004.1 | 0.0 | SH2 domain-containing protein A-like | ||||
TrEMBL | A0A068UD02 | 0.0 | A0A068UD02_COFCA; Uncharacterized protein | ||||
STRING | Solyc07g062050.2.1 | 0.0 | (Solanum lycopersicum) | ||||
STRING | XP_009769180.1 | 0.0 | (Nicotiana sylvestris) |