PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_31652_iso_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 210aa MW: 23290 Da PI: 4.7651 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.6 | 2.1e-11 | 137 | 171 | 4 | 38 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 k+ r++++NReAAr+sR+RKka+i++Le+ +L cra_locus_31652_iso_1_len_627_ver_3 137 QKKLRKLAQNREAARKSRLRKKAYIQQLENNQVKL 171 6999*************************865444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.7E-9 | 130 | 180 | No hit | No description |
SMART | SM00338 | 9.7E-4 | 134 | 197 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.691 | 136 | 173 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.2E-8 | 137 | 172 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.93E-7 | 138 | 177 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 141 | 156 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
XKYSEIVDEY LGFGTEHASN LDQSTIFNPY TTVTAATTGT DLLSGSFNET ANANFPATFP 60 GSQTTQLQTE SQSYLAPILG EYHENWGDLT MEDICFYAGT STHVDGEDKS QQVEIGQFDG 120 AVTNHPVGIS KQNSLEQKKL RKLAQNREAA RKSRLRKKAY IQQLENNQVK LNQLQQEHQR 180 APQQEILISS MGDQSHTLSG NGAMAYDAEX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027123246.1 | 5e-61 | transcription factor TGA2.3-like isoform X1 | ||||
Refseq | XP_027123247.1 | 5e-61 | transcription factor TGA2.3-like isoform X1 | ||||
Refseq | XP_027175555.1 | 5e-61 | transcription factor TGA2.3-like | ||||
Refseq | XP_027175556.1 | 5e-61 | transcription factor TGA2.3-like | ||||
TrEMBL | A0A068UMV1 | 4e-58 | A0A068UMV1_COFCA; Uncharacterized protein |