PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_2595_iso_5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | FAR1 | ||||||||
Protein Properties | Length: 249aa MW: 29059.5 Da PI: 10.0967 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 36 | 2.3e-11 | 65 | 142 | 3 | 91 |
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkw 76 Y++Y+k+ GFsv+k+ +k + + +t C ++ k+++ k++ +r++C a++ ++++g w cra_locus_2595_iso_5_len_1664_ver_3 65 YQAYSKSKGFSVTKKFDSKG-SGHFRKXQTISCDRYRKASTYKQS----------KRIKCPARICEILRDNGMW 127 99***********9987776.4555678899****9998886655..........9*********99999**** PP FAR1 77 evtkleleHnHelap 91 +v+k++++HnHel p cra_locus_2595_iso_5_len_1664_ver_3 128 QVSKVVEQHNHELHP 142 ************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 3.2E-8 | 65 | 142 | IPR004330 | FAR1 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010189 | Biological Process | vitamin E biosynthetic process | ||||
GO:0032259 | Biological Process | methylation | ||||
GO:0051741 | Molecular Function | 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MXENYISESG GELMLNNGSD KEGKLRERSD DAEKLQEPRC QDTEQVLPIS LGKYFNNINE 60 FFYSYQAYSK SKGFSVTKKF DSKGSGHFRK XQTISCDRYR KASTYKQSKR IKCPARICEI 120 LRDNGMWQVS KVVEQHNHEL HPPMSRFMLP HRSLSSNMKR KLEMHDTAGL RYSENVRILE 180 VQAGGSDKLV CLPRDCKNYV XNVRRLNIRV GNADCIDRIF IRMHQKNSNF FHLIPARTEL 240 WVARAPKKF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021672394.1 | 2e-68 | protein FAR1-RELATED SEQUENCE 5-like |