PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_15328_iso_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 323aa MW: 35857.6 Da PI: 9.8775 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.7 | 6.8e-15 | 253 | 296 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ cra_locus_15328_iso_1_len_1451_ver_3 253 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLKKQ 296 79***************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-14 | 248 | 297 | No hit | No description |
SMART | SM00338 | 1.2E-13 | 249 | 321 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.656 | 251 | 296 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-12 | 253 | 296 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.06E-23 | 253 | 299 | No hit | No description |
SuperFamily | SSF57959 | 1.44E-11 | 253 | 301 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 256 | 271 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
MGSQGGIGSS SSMGGNHSQE PKSSLLARQG SIYSLTLDEV QHHLGDLGKP LISMNLDELL 60 KTVWTAEANQ GIGGMDFGVQ QHGQLSPVLN QQSGVTLSRD LSKKTVDQVW HDIQQGQKKN 120 SLDRKSHERQ LTLGEMTLED FLVKAGVVAE PLPKKNLGSG LGIDPLSMQQ QNVQQAAQWM 180 HYQIPSIHQP AYMPGHPVQQ PLPISSNSLI DAAFPESQMA MSPSTLMGTL SDTQTPGRKR 240 VASGDVIEKT VERRQKRMIK NRESAARSRA RKQAYTHELE NKVSRLEEEN ERLKKQREME 300 RALPVLPIPE PKYQLRRTSS SSF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00409 | DAP | Transfer from AT3G56850 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027072798.1 | 1e-178 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_027072799.1 | 1e-178 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_027175921.1 | 1e-178 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_027175922.1 | 1e-178 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_027175924.1 | 1e-178 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 1e-100 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A068VAQ2 | 1e-174 | A0A068VAQ2_COFCA; Uncharacterized protein | ||||
STRING | PGSC0003DMT400072260 | 1e-148 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3334 | 24 | 48 |
Publications ? help Back to Top | |||
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