PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_13338_iso_4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 133aa MW: 15583.7 Da PI: 5.6152 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.6 | 9.9e-12 | 3 | 54 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++ +r+++NRe+ArrsR +K++ ++ + v e+ +eN + +l+ +++ cra_locus_13338_iso_4_len_1130_ver_3 3 IRKRKRMISNRESARRSRMKKQKHMDDMITQVNEIRNENNQILMNLNVTTQL 54 7899***********************************9988887766665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-13 | 1 | 64 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.381 | 2 | 44 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.4E-9 | 3 | 48 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.4E-9 | 4 | 76 | No hit | No description |
SuperFamily | SSF57959 | 1.34E-11 | 4 | 56 | No hit | No description |
CDD | cd14702 | 8.83E-19 | 5 | 55 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 7 | 22 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MDIRKRKRMI SNRESARRSR MKKQKHMDDM ITQVNEIRNE NNQILMNLNV TTQLYLNVEA 60 ENSVLRAQID ELTHRLQSLN DIITCLNASN LLETDQDEVE IIAGGGHDDF LMNPWNLLCF 120 NQPIMPSPDV HFY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 24 | RKRKRMISNRESARRSRMKKQK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the DNA sequence 5'-ACTCAT-3' in target gene promoters. Promotes POX1/PRODH1 expression in response to hypoosmolarity stress (PubMed:15047879). Positively regulates the expression of ASN1 and POX2/PRODH2 genes, which are involved in amino acid metabolism (PubMed:18088315). Regulates several metabolic pathways such as myo-inositol, raffinose and trehalose. Regulates several trehalose metabolism genes, including TRE1, TPP5 and TPP6 (PubMed:21534971). Mediates recruitment of the histone acetylation machinery to activate auxin-induced transcription. Interacts with ADA2B adapter protein to promote ADA2B-mediated recruitment of SAGA-like histone acetyltransferase complexes to specific auxin-responsive genes (PubMed:24861440). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:18088315, ECO:0000269|PubMed:21534971, ECO:0000269|PubMed:24861440}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light (PubMed:9620274). Induced by hypoosmolarity (PubMed:15047879). Repressed by sucrose (at protein level) (PubMed:9721683, PubMed:15208401). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:15208401, ECO:0000269|PubMed:9620274, ECO:0000269|PubMed:9721683}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027074802.1 | 8e-59 | bZIP transcription factor 11-like | ||||
Swissprot | O65683 | 1e-40 | BZP11_ARATH; bZIP transcription factor 11 | ||||
TrEMBL | A0A1S3YC33 | 1e-52 | A0A1S3YC33_TOBAC; bZIP transcription factor 53-like | ||||
TrEMBL | A0A1U7YNV3 | 1e-52 | A0A1U7YNV3_NICSY; ocs element-binding factor 1-like | ||||
STRING | XP_009800919.1 | 2e-53 | (Nicotiana sylvestris) |