PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_11598_iso_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | G2-like | ||||||||
Protein Properties | Length: 205aa MW: 23164.6 Da PI: 6.6226 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 54.4 | 2.8e-17 | 45 | 75 | 1 | 31 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPkt 31 kprl+Wtp+LHerF+eav+qLGG++kAtPkt cra_locus_11598_iso_1_len_1025_ver_3 45 KPRLKWTPDLHERFIEAVNQLGGADKATPKT 75 79****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.9E-13 | 43 | 75 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.73E-5 | 44 | 75 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.9E-11 | 45 | 75 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MYPHHHQGKN IHASSRMSIP PERHLFLQGG NGPGDSGLVL STDAKPRLKW TPDLHERFIE 60 AVNQLGGADK ATPKTSAMSP AYXQTEQRWC EDLNDKRRFL LSMNEEAEKE CAMEKSCSNL 120 SMSIGLQGGW NTNIYSEKGI TETNRDTKFF DQPCSRHDAV PTVKQRSSQE YKMPFFAPKL 180 DLNTDDETDA ASKCKQFDLN GFSWS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023929228.1 | 2e-43 | myb-related protein 2-like isoform X1 | ||||
Refseq | XP_023929229.1 | 2e-43 | myb-related protein 2-like isoform X1 | ||||
Refseq | XP_023929230.1 | 1e-43 | myb-related protein 2-like isoform X2 | ||||
Refseq | XP_023929231.1 | 1e-43 | myb-related protein 2-like isoform X2 | ||||
TrEMBL | A0A2K1Y1Q1 | 2e-41 | A0A2K1Y1Q1_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0013s05670.1 | 3e-42 | (Populus trichocarpa) |