PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

cra_locus_11409_iso_5

Organism

Catharanthus roseus

Taxonomic ID

4058

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus

Family

BES1

Protein Properties

Length: 120aa MW: 13980 Da PI: 9.977

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
cra_locus_11409_iso_5	genome	MPGR	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	162.5	2.6e-50	2	77	1	76
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 ++++r ptwkErEnnkrRERrRRaiaa i+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrk ++ cra_locus_11409_iso_5_len_566_ver_3 2 TSGTRLPTWKERENNKRRERRRRAIAANIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKDASQW 77 5899******************************************************************998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	7.6E-47	3	76	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 120 aa Download sequence Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAANI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKDASQWTEW ISWGDQQRQV HAPLINQVLE PPTTQVLHPP LSQVQLLLML

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-20	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-20	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-20	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-20	6	72	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027127193.1	1e-46	BES1/BZR1 homolog protein 4-like
Swissprot	Q9ZV88	1e-28	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A068UCW3	4e-45	A0A068UCW3_COFCA; Uncharacterized protein
TrEMBL	A0A2P5WYB4	1e-45	A0A2P5WYB4_GOSBA; Uncharacterized protein
STRING	Gorai.002G052400.1	3e-44	(Gossypium raimondii)