PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_11318_iso_5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 319aa MW: 35435.7 Da PI: 5.9933 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.7 | 3.9e-11 | 189 | 233 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L ++ cra_locus_11318_iso_5_len_1547_ver_3 189 KRIKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRV 233 899*********************************988776655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.7E-13 | 185 | 249 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.599 | 187 | 239 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.01E-11 | 189 | 243 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.7E-12 | 189 | 240 | No hit | No description |
Pfam | PF00170 | 1.5E-9 | 189 | 233 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 9.96E-22 | 190 | 240 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 192 | 207 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence Send to blast |
MAQLPPKVPN MMPNWADFPH QKLLAPIEIL GGNISTNHNQ SSWVDEFLDF SSAKRGSHRR 60 SISDSIAFLE VPLVEECRRS SIPGGGGGGA GTGTTTASEF DKFDDEQLMS MFTDEIANSG 120 GQNSNPSSPS DHNSINDDKQ NPDLQMQQQM MKTEPDEVES SCKSDLQFAA CAAQNGTSDI 180 SNEKIFDPKR IKRILANRQS AQRSRVRKLQ YISELERSVT SLQAEVSVLS PRVAFLDHQR 240 LVLNVDNSVL KQRIAALAQD KIFKDAHQEA LKREIERLRQ IYYQQNLKKM ENATPPDTKT 300 QPPAAAAATA PMEKEQPVN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027172353.1 | 1e-162 | basic leucine zipper 61-like | ||||
Refseq | XP_027172358.1 | 1e-162 | basic leucine zipper 61-like | ||||
Swissprot | Q9M2K4 | 1e-107 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A068V5U8 | 1e-159 | A0A068V5U8_COFCA; Uncharacterized protein | ||||
STRING | XP_009777081.1 | 1e-142 | (Nicotiana sylvestris) |
Publications ? help Back to Top | |||
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