PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | cra_locus_11294_iso_6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
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Family | bZIP | ||||||||
Protein Properties | Length: 137aa MW: 16058.2 Da PI: 10.5457 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.7 | 5.9e-09 | 13 | 63 | 13 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 NR +rsR RK+++i+eLe+ v+ L++ ++L+ ++ +l ++ +l e+ cra_locus_11294_iso_6_len_1781_ver_3 13 NRHPGQRSRVRKLQYIAELERTVDILQKFESDLAARVGSLFQQRLALSVEN 63 89999***********************************99998888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 6.64E-6 | 9 | 57 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.5E-7 | 13 | 75 | No hit | No description |
CDD | cd14703 | 3.43E-11 | 13 | 56 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence Send to blast |
MSIXELYRLT FMNRHPGQRS RVRKLQYIAE LERTVDILQK FESDLAARVG SLFQQRLALS 60 VENNKLKQKV VKLQQQKIIA DGQYQSLRKE VERLKTSLAY SSRKDKVSTN FRLSTTIEMA 120 NSEANWQNLD LENLHLN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027160417.1 | 1e-49 | basic leucine zipper 61 | ||||
Refseq | XP_027160419.1 | 1e-49 | basic leucine zipper 61 | ||||
Refseq | XP_027160420.1 | 1e-49 | basic leucine zipper 61 | ||||
Swissprot | Q5JMK6 | 2e-19 | BZP06_ORYSJ; Basic leucine zipper 6 | ||||
TrEMBL | A0A068TUK6 | 8e-48 | A0A068TUK6_COFCA; Uncharacterized protein | ||||
STRING | Solyc11g006490.1.1 | 7e-46 | (Solanum lycopersicum) |
Publications ? help Back to Top | |||
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