PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cre16.g667150.t1.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
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Family | bHLH | ||||||||
Protein Properties | Length: 227aa MW: 23604.1 Da PI: 8.9618 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.4 | 0.00061 | 141 | 161 | 10 | 30 |
HHHHHHHHHHHHHHHCTSCCC CS HLH 10 rrRRdriNsafeeLrellPka 30 r R+ iN+++ L++l+P++ Cre16.g667150.t1.2 141 RILRQGINNSLKDLKSLIPNS 161 56799**************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MAPGPIDQDL WFGLDKLEHW LACGFCTLVT YWLCKRHYRL FRGRFTFGLL VGLLVGLLKE 60 LGDYLQLWPG ALSGKDLVAD VAGSVCAAAG LYLVEAKWGP PQPPHVDRHA AGCWGTIRSV 120 LGLSNEPRVV DLEHGLVYGQ RILRQGINNS LKDLKSLIPN SGALTRWGNL YGYKPLAVGG 180 GGGGRGGLGL GGGGGGGGIS SGGAVGSGGA MELHQTASKR ADPSSA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Cre16.g667150.t1.2 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_001691966.1 | 1e-127 | predicted protein, partial | ||||
TrEMBL | A0A2K3CUJ2 | 1e-158 | A0A2K3CUJ2_CHLRE; Uncharacterized protein | ||||
STRING | EDP04456 | 1e-126 | (Chlamydomonas reinhardtii) |
Link Out ? help Back to Top | |
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Phytozome | Cre16.g667150.t1.2 |