PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cre16.g649433.t1.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
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Family | ERF | ||||||||
Protein Properties | Length: 1260aa MW: 122649 Da PI: 9.2921 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.9 | 9e-12 | 1197 | 1248 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GV +++ +grW A+Ir ++e+ + +++lg+++ta eAa a++aa ++++g Cre16.g649433.t1.1 1197 RYVGVIQRP-NGRWGAQIRMVCEGS-HYTVWLGTHDTAREAALAYDAAVRRKYG 1248 699******.8*********97743.6*********************999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 16.278 | 1197 | 1256 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.37E-13 | 1197 | 1258 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 4.35E-17 | 1197 | 1257 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 2.9E-19 | 1197 | 1258 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.1E-16 | 1197 | 1258 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1260 aa Download sequence Send to blast |
MQQPHPSDKL EHRCHEDVVG GAAVPAPGVA AAGAAPTAAT AAGAAGASAA GACGGGGGGD 60 EQQQPGRRQN HEERQTAAVV VALEDQPHQH QQQGPSERCV AGEPPLLAAK ASAEAAGEVT 120 VAATAAAATA AAATAAVAAA TSTTTAAGPF DNDISNNGGS GARNGYRRRC RCMGGAGGTS 180 YCLMLRRAAA AAPPTHFNNL LAAAAASHAA NEFAAVAAAG SLPASGAAAG EKVGIPARVL 240 SAPAAATVEA AAGGAAAAQQ QCALRAAAAA GACGGGGEPC QQVPPVMMRP AAGARLLTVA 300 GSCGTTGLQQ APSPCAAAAG SSSSSNMLRA RMHAWAQRRR QRHASASSAA VASAAAAAAA 360 TAAATAAAAA AANAMAKEVA GGSVCIAATD IAGASGGGRP RQPNAVDVIG GACGCGCGGG 420 CGKGGGGGGG CVQQVQQSLR HEDRRQQWPL LAAARGTGGV SHQTGAVSHG GGRGCLPPLP 480 TTAAAAALNG AASGSAAAVP VAVAAAEPHS VNIAAAGSAG ARPAAAVAIQ PQSLAAAAAA 540 AAASAQQQRA AQQQRRQQQE RERQQRSAKL VAALAEHTRL RHVRMQQGAA DGSKLTTLPP 600 PAGASGSRQV QQQQQQQQQQ QQPAVARLLL RRDAAAPPAD RALASPLAQA AAAAAAAVPP 660 KQRQQQQAQE QQAAAAEAAH QHGDQQDRRQ LEHHQSDAGD EKPQLQPLLP PPTQAPQSCC 720 CQPPPAPALA LAPPANVPAA GAPDAAAAAS SAGHARHLGH QAGPLLLGPL EHVVARHQPP 780 PQHRRQRHQQ QLQHTRRRHW PWMEAPAAAA QQQPAAVTGA AGPQTVRPLA ELPNARAVAA 840 RAAAARAAAA AAGAGGGGNT ASNAGNGVVG DVGRTLQAQG LRRERQQRTR SLWDLYGGEI 900 DGGEAGGGSD GAAGAASGSS RGDDSGEQLP PPPRPPQQPQ IKRARIAAPV QQCRPAAVAV 960 AAAGWGAAAA AHSSGAGAGA SAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAASAGAGAG 1020 GGAAGFATTS ASGTRTAPPL ANVSIQGGSS GGAAGGNGSS GRAAASGGNG HRGIQRQGGA 1080 RAAPGGEGGG RGGRRSGGSA AAAAGPYSLA ASATAADGGG RGRRGSRGRG RGRGSHKQAA 1140 GSTAGTSREV GQQEQGQKKA EEEEEEEEEE EGEEEAEADE EEEEAAEEAA RSSARGRYVG 1200 VIQRPNGRWG AQIRMVCEGS HYTVWLGTHD TAREAALAYD AAVRRKYGSQ ARCNFPDEQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 1123 | 1133 | RGSRGRGRGRG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Cre16.g649433.t1.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2K3CSQ4 | 0.0 | A0A2K3CSQ4_CHLRE; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP132 | 15 | 40 | Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.3 | 2e-12 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Cre16.g649433.t1.1 |