PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre16.g649433.t1.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family ERF
Protein Properties Length: 1260aa    MW: 122649 Da    PI: 9.2921
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre16.g649433.t1.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99e-1211971248255
                 AP2    2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55  
                          +y GV +++ +grW A+Ir ++e+  + +++lg+++ta eAa a++aa ++++g
  Cre16.g649433.t1.1 1197 RYVGVIQRP-NGRWGAQIRMVCEGS-HYTVWLGTHDTAREAALAYDAAVRRKYG 1248
                          699******.8*********97743.6*********************999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.27811971256IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-1311971258IPR016177DNA-binding domain
CDDcd000184.35E-1711971257No hitNo description
Gene3DG3DSA:3.30.730.102.9E-1911971258IPR001471AP2/ERF domain
SMARTSM003805.1E-1611971258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1260 aa     Download sequence    Send to blast
MQQPHPSDKL EHRCHEDVVG GAAVPAPGVA AAGAAPTAAT AAGAAGASAA GACGGGGGGD  60
EQQQPGRRQN HEERQTAAVV VALEDQPHQH QQQGPSERCV AGEPPLLAAK ASAEAAGEVT  120
VAATAAAATA AAATAAVAAA TSTTTAAGPF DNDISNNGGS GARNGYRRRC RCMGGAGGTS  180
YCLMLRRAAA AAPPTHFNNL LAAAAASHAA NEFAAVAAAG SLPASGAAAG EKVGIPARVL  240
SAPAAATVEA AAGGAAAAQQ QCALRAAAAA GACGGGGEPC QQVPPVMMRP AAGARLLTVA  300
GSCGTTGLQQ APSPCAAAAG SSSSSNMLRA RMHAWAQRRR QRHASASSAA VASAAAAAAA  360
TAAATAAAAA AANAMAKEVA GGSVCIAATD IAGASGGGRP RQPNAVDVIG GACGCGCGGG  420
CGKGGGGGGG CVQQVQQSLR HEDRRQQWPL LAAARGTGGV SHQTGAVSHG GGRGCLPPLP  480
TTAAAAALNG AASGSAAAVP VAVAAAEPHS VNIAAAGSAG ARPAAAVAIQ PQSLAAAAAA  540
AAASAQQQRA AQQQRRQQQE RERQQRSAKL VAALAEHTRL RHVRMQQGAA DGSKLTTLPP  600
PAGASGSRQV QQQQQQQQQQ QQPAVARLLL RRDAAAPPAD RALASPLAQA AAAAAAAVPP  660
KQRQQQQAQE QQAAAAEAAH QHGDQQDRRQ LEHHQSDAGD EKPQLQPLLP PPTQAPQSCC  720
CQPPPAPALA LAPPANVPAA GAPDAAAAAS SAGHARHLGH QAGPLLLGPL EHVVARHQPP  780
PQHRRQRHQQ QLQHTRRRHW PWMEAPAAAA QQQPAAVTGA AGPQTVRPLA ELPNARAVAA  840
RAAAARAAAA AAGAGGGGNT ASNAGNGVVG DVGRTLQAQG LRRERQQRTR SLWDLYGGEI  900
DGGEAGGGSD GAAGAASGSS RGDDSGEQLP PPPRPPQQPQ IKRARIAAPV QQCRPAAVAV  960
AAAGWGAAAA AHSSGAGAGA SAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAASAGAGAG  1020
GGAAGFATTS ASGTRTAPPL ANVSIQGGSS GGAAGGNGSS GRAAASGGNG HRGIQRQGGA  1080
RAAPGGEGGG RGGRRSGGSA AAAAGPYSLA ASATAADGGG RGRRGSRGRG RGRGSHKQAA  1140
GSTAGTSREV GQQEQGQKKA EEEEEEEEEE EGEEEAEADE EEEEAAEEAA RSSARGRYVG  1200
VIQRPNGRWG AQIRMVCEGS HYTVWLGTHD TAREAALAYD AAVRRKYGSQ ARCNFPDEQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
111231133RGSRGRGRGRG
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre16.g649433.t1.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K3CSQ40.0A0A2K3CSQ4_CHLRE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1321540
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.32e-12ERF family protein