PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cre09.g386753.t1.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
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Family | S1Fa-like | ||||||||
Protein Properties | Length: 74aa MW: 7815.21 Da PI: 10.5438 | ||||||||
Description | S1Fa-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | S1FA | 37 | 7e-12 | 22 | 72 | 16 | 70 |
S1FA 16 ivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70 +vl++vgg ll +i y n P r kk + k++kreklk Gv +PG+ Cre09.g386753.t1.1 22 VVLVIVGGALLY----SFIQYQRMMANAPARPKKKLGAKQIKREKLKMGVRPPGD 72 344455555443....56677777789**************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04689 | 7.7E-9 | 17 | 72 | IPR006779 | DNA binding protein S1FA |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 74 aa Download sequence Send to blast |
MADATGSTQD DGSNTVIVIV GVVLVIVGGA LLYSFIQYQR MMANAPARPK KKLGAKQIKR 60 EKLKMGVRPP GDD* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Cre.19614 | 5e-69 | normal conditions |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Cre09.g386753.t1.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2K3DCH3 | 6e-45 | A0A2K3DCH3_CHLRE; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP14185 | 2 | 2 |
Link Out ? help Back to Top | |
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Phytozome | Cre09.g386753.t1.1 |