PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre07.g349152.t2.1
Organism
Chlamydomonas reinhardtii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bHLH
Protein Properties Length: 696aa    MW: 68700.9 Da    PI: 6.2269
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre07.g349152.t2.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.6e-10356421449
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC.......................TTS-.STCHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkas....................kapskK.lsKaeiLekAve 49 
                         +h+++E++RRdr+Ns ++eLr l+P++                     +  +++   K ++L  +v 
  Cre07.g349152.t2.1 356 SHSAVEKQRRDRLNSLIDELRCLVPPQAepaggaaaaaaaaaaaaeggA-AAERnRPKHAVLADTVA 421
                         8*************************54477777777766666666633.33333666666666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.084352426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.43E-5355381No hitNo description
Gene3DG3DSA:4.10.280.104.7E-10356429IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.2E-8356431IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-7356422IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-4358432IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550213.21E-6499547No hitNo description
Gene3DG3DSA:3.30.70.2603.3E-4502547No hitNo description
CDDcd048734.91E-7503545No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 696 aa     Download sequence    Send to blast
MELEDAVCAT EADTHLASVL GGDSQDLLQD LLNVFNEEPP FGGSFVQEQP DAPTSTRTEN  60
AGSGQPASSS EGQAASGGTA RMPSPQLGTP PVVEAQLVHP NLLGPAKPEH PTAVALAAPA  120
APTAWPVPGP AAALSAMTFG SPTQPSDAGV PPFATNASLA AGMCFAPATS AMAASNAGPQ  180
QQHPALAMPT PVVATAATHP AALLAGPPAA GTSPQPQLQL QAQTPSQQAQ QLLLQQHLQH  240
LHLQQQQALH QMLRAASLPA ATGTSGLGAA TDAHAAVASA AAYAAAAAAA VARNSLEASA  300
AAAAGSSRSA PPAASNHSLA AFAAAAAAAG ASLASPRSGG NERGLATTAA GAAGVSHSAV  360
EKQRRDRLNS LIDELRCLVP PQAEPAGGAA AAAAAAAAAA EGGAAAERNR PKHAVLADTV  420
ALVRALKQQL LLGSVTDVLG PSAGEGRGRT GGSPPPPLSI SGPTPTRDAP SPAPSPPPGA  480
AANQLAAGQS HVIVKRGPDC YYVQIECRDR RGLLSDIVGA LKELPLQIRN ASVTTGADGT  540
VHDVFELAPT TPTTTAATTT SSAAAPPAAA AVAAALSYEP AALKAWVQAA LAQRELQQQA  600
ARQQQEQQAA AAAMQMQMLP PGGGHSFPPA AGATGMALTS GGSLATAAPV ALATSFAAPA  660
AQHAAAAAGA TDAELMFANF NMEAEQLMQK RPRAH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre07.g349152.t2.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001692466.11e-176predicted protein
TrEMBLA0A2K3DL560.0A0A2K3DL56_CHLRE; Uncharacterized protein
STRINGEDP039441e-176(Chlamydomonas reinhardtii)