PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre07.g349152.t1.1
Organism
Chlamydomonas reinhardtii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bHLH
Protein Properties Length: 700aa    MW: 69100.3 Da    PI: 6.2273
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre07.g349152.t1.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.6e-10360425449
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC.......................TTS-.STCHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkas....................kapskK.lsKaeiLekAve 49 
                         +h+++E++RRdr+Ns ++eLr l+P++                     +  +++   K ++L  +v 
  Cre07.g349152.t1.1 360 SHSAVEKQRRDRLNSLIDELRCLVPPQAepaggaaaaaaaaaaaaeggA-AAERnRPKHAVLADTVA 425
                         8*************************54477777777766666666633.33333666666666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.084356430IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.45E-5359385No hitNo description
PfamPF000101.7E-7360426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.2E-8360435IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-10360433IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-4362436IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550213.25E-6503551No hitNo description
Gene3DG3DSA:3.30.70.2603.3E-4506551No hitNo description
CDDcd048734.95E-7507549No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 700 aa     Download sequence    Send to blast
MELEDAVCAT EADTHLASVL GGDSQDLLQD LLNVFNEEPP FGGSFVQEQP DAPTSTRTEN  60
AGSGQPASSS EGQAASGGTA RMPSPQLGTP PVVEAQLVHP NLLGPAKPEH PTAVALAAPA  120
APTAWPVPGP AAALSAMTFG SPTQPSDAGV PPFATNASLA AGMCFAPATS AMAASNAGPQ  180
QQHPALAMPT PVVATAATHP AALLAGPPAA GTSPQPQLQL QAQTPSQQAQ QLLLQQHLQH  240
LHLQQQQALH QMLRAASLPA ATGDRAGTSG LGAATDAHAA VASAAAYAAA AAAAVARNSL  300
EASAAAAAGS SRSAPPAASN HSLAAFAAAA AAAGASLASP RSGGNERGLA TTAAGAAGVS  360
HSAVEKQRRD RLNSLIDELR CLVPPQAEPA GGAAAAAAAA AAAAEGGAAA ERNRPKHAVL  420
ADTVALVRAL KQQLLLGSVT DVLGPSAGEG RGRTGGSPPP PLSISGPTPT RDAPSPAPSP  480
PPGAAANQLA AGQSHVIVKR GPDCYYVQIE CRDRRGLLSD IVGALKELPL QIRNASVTTG  540
ADGTVHDVFE LAPTTPTTTA ATTTSSAAAP PAAAAVAAAL SYEPAALKAW VQAALAQREL  600
QQQAARQQQE QQAAAAAMQM QMLPPGGGHS FPPAAGATGM ALTSGGSLAT AAPVALATSF  660
AAPAAQHAAA AAGATDAELM FANFNMEAEQ LMQKRPRAH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre07.g349152.t1.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001692466.11e-178predicted protein
TrEMBLA0A2K3DL800.0A0A2K3DL80_CHLRE; Uncharacterized protein
STRINGEDP039441e-177(Chlamydomonas reinhardtii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP34551013