PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre03.g209953.t2.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family AP2
Protein Properties Length: 1421aa    MW: 136035 Da    PI: 6.7908
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre03.g209953.t2.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.29.7e-094189255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        g++GV++++ + rW A I         + +slg f+ +e+Aa+ +++a+++++g
  Cre03.g209953.t2.1 41 GFRGVCYNRMTRRWQAGIAAH-----GRAISLGAFDAEEDAARIYDKAALRIRG 89
                        79***************9994.....4************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.6E-941103IPR001471AP2/ERF domain
PfamPF008472.4E-44189IPR001471AP2/ERF domain
PROSITE profilePS5103214.3944197IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-124198IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.2E-114297IPR001471AP2/ERF domain
CDDcd000185.94E-114298No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1421 aa     Download sequence    Send to blast
MEALAALSGG HGHAPAAGVL SRRKLPSETA QQGQPPLHPL GFRGVCYNRM TRRWQAGIAA  60
HGRAISLGAF DAEEDAARIY DKAALRIRGL KATVNFPVRD YLLPDGALAL DLQVEALLLE  120
AFLSRAVPAD AATAAAVGDV VRQCLGRING ADPADLQEAA EALGPGYMRL MGLIADAAEL  180
LAASAATGVG APGGGGGAAA AGGATGGAGV VSHGSGEAGA GAGTGAGVGI TGNGDAVGAR  240
SGLGREAGGP SVSTDGSQRA DAAAAASLSA GGGVEGLRGA ASCQGPVGAG GPCVGVAPDG  300
GLRRDKPGHS PSPSAAEGAV GGTTVAARRA GPPEAAAAPD GAGAQLPPIP PIATPPYLPP  360
NFMQNMCQLL ATHTRATESD QQRQRGKDAP AAAAPPPPAV VVAVRQLEEF GFPLPLLMQG  420
ADHLASAGIV SPQHFKMLQA AVGGGAAAAG AKRKQPEDEA AEALPHKDHS GDVDGQATKR  480
RELERVGEPA PAAPAASGRT RSPSVPPAGA GLRLDPSSAV VMAAATVAAG AAGGVPLAAM  540
PTAPTEQAAV MTAIENAAAA VAAMPPVGPV PPALALAGSG LIGGGGGPPL KHIGLGRRLF  600
QAIQGQLPPG CELESLMPPK CGFVGVLYAA PPSCSASGNQ AGAGLWDGAA VRDLGLYSSD  660
RDARQAVNSA ARLLATTLAA ATGGGGSGVG AAGSAGPGAG DAGAGRGAMA PPAMRGAGAG  720
ARGGGGLASI NSASLFRSSG NSSMSAGGTG AVAPAPATAP PAGARHGGRP LEPAPSAGGL  780
STLRSGPSFS GPMRAHAAAG AVTAGGRLPA AGSLAAAGST GRRDGPLRQT PAPPPLLRSE  840
MSAGGHQGPY LVGGPDVADD GSVNLLCQIL VPQAEPLTSD DLNNVIARSL TPAALQSLLG  900
NNVTAAAAAA AVANGLSAAN RGPLLAPARP SQPNGTARPA PPFMPGPARG GAAAAPPPPG  960
MDPNPFRQQQ SLNLQEDMGS PPNPFRQHQR SGLGAGSGSG SAAARGTNWL AAPPGPAEAK  1020
EGQELTIEQQ QDLLRQAKAA AAAARVSGSG SGAAAAADVR RRTTAADEAL GRMPSLSGGV  1080
AAAVAAAADE VLYAGTAGTA FGSADAAAAG GGGGTHVDLF FSRRMIAAAS GCVSGGGAGG  1140
SGAVRRTSGS GGAAAGSGAG ASPPPPPLAP KQEASGEGLP LGPCIPAGAA ARGGAGAALP  1200
LGPPPPPLQP PGDLDMDDAA EPPAPESATV SKGRSEAASP PLPEVAAAPD SAAAAAAAAA  1260
VIGSGSASFV KGGAEPSPDT EMADAPADAP AAAQAWNRGG SRDGANTSNS AATARAQSSG  1320
LPDASACLTG DADVTQNAPS RATGAAEGNA PSANGLSRSA DRSGDCSAGG GGDGDGSAAP  1380
RLQRAVSREF AAVANLVGVG LQEALAKLAK TGHQESPPSK *
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre03.g209953.t2.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K3DZW40.0A0A2K3DZW4_CHLRE; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.13e-12AP2 family protein