PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_91.71
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 192aa    MW: 20833.4 Da    PI: 8.6721
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_91.71genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-172978255
                          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                  y+GVr +  +g+Wv+eIr p+    + +r++lg+++ +e+Aa+a++aa  +++g
  evm.model.supercontig_91.71 29 PYRGVRMRA-WGKWVSEIRIPK----TgRRIWLGSYDAPEKAARAYDAAQYCIRG 78
                                 69****998.**********95....35***********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.97E-192987IPR016177DNA-binding domain
SMARTSM003802.6E-292992IPR001471AP2/ERF domain
PROSITE profilePS5103220.9162986IPR001471AP2/ERF domain
CDDcd000184.13E-263088No hitNo description
Gene3DG3DSA:3.30.730.102.7E-263087IPR001471AP2/ERF domain
PfamPF008473.1E-113078IPR001471AP2/ERF domain
PRINTSPR003674.9E-93041IPR001471AP2/ERF domain
PRINTSPR003674.9E-95268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MDSRPSSPPK SPNSSLPQKR VRRDRKPKPY RGVRMRAWGK WVSEIRIPKT GRRIWLGSYD  60
APEKAARAYD AAQYCIRGDG GPFNFPANKK PQLPEGSLDS LSKEDIQTIA TNFAAGASAS  120
SPVAAPATTQ VSVNTPASFD FPVSGSCVTK SEVAGEPYFP STAIEEAANS VENLQLDDFL  180
MLDIEWISDL L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1530861572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_91.71
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783816e-31KF678381.1 Morus notabilis dehydration responsive element binding transcription factor (DREB5E) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021893531.11e-138ethylene-responsive transcription factor ERF015
SwissprotQ6NLD59e-73ERF15_ARATH; Ethylene-responsive transcription factor ERF015
TrEMBLA0A384LCY22e-70A0A384LCY2_ARATH; Uncharacterized protein
TrEMBLC0SVK92e-70C0SVK9_ARATH; Uncharacterized protein At4g31060 (Fragment)
STRINGevm.model.supercontig_91.711e-137(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM148991620
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.17e-67ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]