PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_7.36
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 311aa    MW: 34922.7 Da    PI: 5.3032
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_7.36genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.4e-20135185255
                         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 +y+GVr+++ +g+++AeIrd      k +r++lg+f+taeeAa a+++a+++++g
  evm.model.supercontig_7.36 135 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFDTAEEAALAYDKAALRIKG 185
                                 7********.**********3...2234************************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.7E-31134193IPR001471AP2/ERF domain
CDDcd000183.38E-29135193No hitNo description
SuperFamilySSF541713.4E-23135194IPR016177DNA-binding domain
SMARTSM003803.2E-37135199IPR001471AP2/ERF domain
PROSITE profilePS5103223.894135193IPR001471AP2/ERF domain
PfamPF008471.2E-14135185IPR001471AP2/ERF domain
PRINTSPR003673.1E-11136147IPR001471AP2/ERF domain
PRINTSPR003673.1E-11159175IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MSNTVDGQND QDTHQEQSEV ILENVWASFI GENGGDKIRK SSLEVCKPWE ELPSLAIRDD  60
SARILRRLPS LGRWMSMGAE AWDELLEGGF DLARHEKQSC EDNSTSTRLC TDPPWPKKVT  120
IAARAGQENK VSTRHYRGVR RRPWGKYAAE IRDSSRKGAR VWLGTFDTAE EAALAYDKAA  180
LRIKGPKAYL NFPLDTVAKA LGINYSSDHQ HDKNLATSSS TKISQGNYQS RTFLEGEATV  240
SVARKRASGD WELPHDRDNC YNENMLIDDH QRLMKRINCS VGDETLGNEF DVVEFEDLGS  300
DYLDSLLSSF *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-27134194161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A5e-27134194464ATERF1
3gcc_A5e-27134194464ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_7.36
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021907732.10.0ethylene-responsive transcription factor ERF091
TrEMBLA0A2I4G3M87e-91A0A2I4G3M8_JUGRE; ethylene-responsive transcription factor ERF091-like
STRINGevm.model.supercontig_7.360.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.17e-30ERF family protein