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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
evm.model.supercontig_6.41 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
GRAS |
| Protein Properties |
Length: 433aa MW: 48234.2 Da PI: 5.8701 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_6.41 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 301.5 | 2.1e-92 | 31 | 429 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl. 83
++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+ f++AL ar a+++s ++ a ++ ++++ n ++ ++ +++
evm.model.supercontig_6.41 31 EQLLVHCANAIDSNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALIARAAKTGSCTMLAAAMANAHSCNLATDTHKFSVi 113
79****************************************************76666666666666655644444444333 PP
GRAS 84 ....fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeel 158
f++++P+++f++ +aN aIl+aveg ++Hi+D+++++++Q p+Ll+a+a+R egpp +++T+ g e + ++
evm.model.supercontig_6.41 114 elasFVDLTPWHRFGFTAANAAILDAVEGYAAIHIVDLSLTHCMQIPTLLDAIANRLEGPPLVKLTVAGGIEDVpppmLDLSY 196
4488**************************************************************99998877887778899 PP
GRAS 159 eetgerLakfAeelgvpfefnvl.......vakrledleleeLrvkp......gEalaVnlvlqlhrll............de 216
ee+g++L +fA++ ++ +ef+++ + ++l +e+Lrv++ +Eal++n++++lh++ +
evm.model.supercontig_6.41 197 EELGSKLVNFARSRNIMLEFRAIpssytdgY----SAL-IEQLRVQHllypesNEALVINCHMMLHYIAeetlsplispntTN 274
**********************977633333....333.66666666666669****************9********99888 PP
GRAS 217 svsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299
+++ +s r+ +Lk +++l P+vvvvv+++ad +s++++ r+ +a++y++ +d++++ lpr s++r+++E+ + ++i+nv+a
evm.model.supercontig_6.41 275 PTTATSLRTIFLKELRGLDPTVVVVVDEDADFTSNNLVCRLRSAFNYMWIPYDTIDTFLPRGSKHRQWYEAD-ICWKIENVIA 356
88888899****************************************************************.********** PP
GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+eg +r+er e +++W +r+++a F+ + ++e+a++++k++l +++ g+ ++ e++ lvl+Wk++++v++++W
evm.model.supercontig_6.41 357 HEGLQRVERVEPKSRWVQRMRNASFRGLGFGEEAVSEVKTMLDEHA-AGWGLKREEDDLVLTWKGHNVVFATVW 429
**********************************************.8999*********************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 433 aa
Download sequence Send
to blast |
MNKNQLHRTR PWPGFPTSKA FGNFGDANCM EQLLVHCANA IDSNDATLAQ QILWVLNNIA 60
PPDGDSNQRL TCAFLRALIA RAAKTGSCTM LAAAMANAHS CNLATDTHKF SVIELASFVD 120
LTPWHRFGFT AANAAILDAV EGYAAIHIVD LSLTHCMQIP TLLDAIANRL EGPPLVKLTV 180
AGGIEDVPPP MLDLSYEELG SKLVNFARSR NIMLEFRAIP SSYTDGYSAL IEQLRVQHLL 240
YPESNEALVI NCHMMLHYIA EETLSPLISP NTTNPTTATS LRTIFLKELR GLDPTVVVVV 300
DEDADFTSNN LVCRLRSAFN YMWIPYDTID TFLPRGSKHR QWYEADICWK IENVIAHEGL 360
QRVERVEPKS RWVQRMRNAS FRGLGFGEEA VSEVKTMLDE HAAGWGLKRE EDDLVLTWKG 420
HNVVFATVWV PT*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
