PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_33.181
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family G2-like
Protein Properties Length: 225aa    MW: 24623.8 Da    PI: 10.0821
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_33.181genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.21.8e-334599155
                       G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                                  k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  evm.model.supercontig_33.181 45 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 99
                                  79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.0642102IPR017930Myb domain
TIGRFAMsTIGR015573.1E-2645100IPR006447Myb domain, plants
SuperFamilySSF466892.69E-174599IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.8E-3245100IPR009057Homeodomain-like
PfamPF002491.0E-74798IPR001005SANT/Myb domain
PfamPF143791.1E-23131177IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MYHAKKISTA NLVPHKPQGA EQFPSTGTLG GNVVNNSTSA GGGGKQRLRW TSDLHDRFVD  60
AITQLGGPDR ATPKGVLRVM GVPGLTIYHV KSHLQKYRLA KYLPESPADG LKDEKKDAGD  120
SITTPDSSPG VQINDTLRMQ MEVQKRLHEQ LEVQRQLQMR IEAQGKYLQK IIEEQQRIGS  180
KLKATEAVDK EKASESEASA DASEGLLSPR KKQKRNDDQA ASKS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-2544102159Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-2544102159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-2544102159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-2544102159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-2544102159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-2544102159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-2544102159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-2544102159Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_33.181
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021901350.11e-164myb family transcription factor PHL7-like
SwissprotQ9SJW06e-71PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A1U7ZTK71e-116A0A1U7ZTK7_NELNU; myb family transcription factor PHL7-like
STRINGevm.model.supercontig_33.1811e-164(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM87532536
Representative plantOGRP7817262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.19e-73G2-like family protein